Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHCHD1Q96BP2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHCHD1Q96BP2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHCHD1Q96BP2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHCHD1Q96BP2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.32■■□□□ 1
CHCHD1Q96BP2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHCHD1Q96BP2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHCHD1Q96BP2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHCHD1Q96BP2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHCHD1Q96BP2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CHCHD1Q96BP2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHCHD1Q96BP2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHCHD1Q96BP2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHCHD1Q96BP2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHCHD1Q96BP2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.2■□□□□ 0.98
CHCHD1Q96BP2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHCHD1Q96BP2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.18■□□□□ 0.98
CHCHD1Q96BP2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.18■□□□□ 0.98
CHCHD1Q96BP2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHCHD1Q96BP2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHCHD1Q96BP2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHCHD1Q96BP2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHCHD1Q96BP2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHCHD1Q96BP2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHCHD1Q96BP2 AL161658.1-201ENST00000623641 1967 ntBASIC21.09■□□□□ 0.97
CHCHD1Q96BP2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHCHD1Q96BP2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHCHD1Q96BP2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHCHD1Q96BP2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHCHD1Q96BP2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHCHD1Q96BP2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHCHD1Q96BP2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHCHD1Q96BP2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CHCHD1Q96BP2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHCHD1Q96BP2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHCHD1Q96BP2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.98■□□□□ 0.95
CHCHD1Q96BP2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHCHD1Q96BP2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHCHD1Q96BP2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHCHD1Q96BP2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHCHD1Q96BP2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHCHD1Q96BP2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHCHD1Q96BP2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHCHD1Q96BP2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHCHD1Q96BP2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.89■□□□□ 0.94
CHCHD1Q96BP2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHCHD1Q96BP2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHCHD1Q96BP2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHCHD1Q96BP2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHCHD1Q96BP2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHCHD1Q96BP2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHCHD1Q96BP2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHCHD1Q96BP2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHCHD1Q96BP2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHCHD1Q96BP2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHCHD1Q96BP2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHCHD1Q96BP2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHCHD1Q96BP2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHCHD1Q96BP2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHCHD1Q96BP2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHCHD1Q96BP2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHCHD1Q96BP2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHCHD1Q96BP2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHCHD1Q96BP2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHCHD1Q96BP2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHCHD1Q96BP2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHCHD1Q96BP2 AC145285.7-201ENST00000614819 1539 ntBASIC20.76■□□□□ 0.91
CHCHD1Q96BP2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD1Q96BP2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.74■□□□□ 0.91
CHCHD1Q96BP2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD1Q96BP2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD1Q96BP2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD1Q96BP2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHCHD1Q96BP2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHCHD1Q96BP2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHCHD1Q96BP2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.66■□□□□ 0.9
CHCHD1Q96BP2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHCHD1Q96BP2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHCHD1Q96BP2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHCHD1Q96BP2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHCHD1Q96BP2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHCHD1Q96BP2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD1Q96BP2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CHCHD1Q96BP2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD1Q96BP2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHCHD1Q96BP2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHCHD1Q96BP2 ABCB10P3-201ENST00000561950 2166 ntBASIC20.58■□□□□ 0.89
CHCHD1Q96BP2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD1Q96BP2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD1Q96BP2 AC139426.1-201ENST00000568218 2529 ntBASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 ABCB10P1-201ENST00000614297 2181 ntBASIC20.55■□□□□ 0.88
CHCHD1Q96BP2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD1Q96BP2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD1Q96BP2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.53■□□□□ 0.88
CHCHD1Q96BP2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHCHD1Q96BP2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms