Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.28■■□□□ 1.8
LSMEM1Q8N8F7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LSMEM1Q8N8F7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
LSMEM1Q8N8F7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LSMEM1Q8N8F7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
LSMEM1Q8N8F7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
LSMEM1Q8N8F7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LSMEM1Q8N8F7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LSMEM1Q8N8F7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LSMEM1Q8N8F7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
LSMEM1Q8N8F7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LSMEM1Q8N8F7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LSMEM1Q8N8F7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
LSMEM1Q8N8F7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSMEM1Q8N8F7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSMEM1Q8N8F7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LSMEM1Q8N8F7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LSMEM1Q8N8F7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LSMEM1Q8N8F7 AC006077.2-201ENST00000623591 457 ntBASIC26.13■■□□□ 1.77
LSMEM1Q8N8F7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LSMEM1Q8N8F7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSMEM1Q8N8F7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
LSMEM1Q8N8F7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LSMEM1Q8N8F7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.02■■□□□ 1.76
LSMEM1Q8N8F7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
LSMEM1Q8N8F7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26■■□□□ 1.75
LSMEM1Q8N8F7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26■■□□□ 1.75
LSMEM1Q8N8F7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LSMEM1Q8N8F7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LSMEM1Q8N8F7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
LSMEM1Q8N8F7 ZNRF2P1-201ENST00000441407 443 ntBASIC25.92■■□□□ 1.74
LSMEM1Q8N8F7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
LSMEM1Q8N8F7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
LSMEM1Q8N8F7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
LSMEM1Q8N8F7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LSMEM1Q8N8F7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.88■■□□□ 1.73
LSMEM1Q8N8F7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LSMEM1Q8N8F7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LSMEM1Q8N8F7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LSMEM1Q8N8F7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LSMEM1Q8N8F7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LSMEM1Q8N8F7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.85■■□□□ 1.73
LSMEM1Q8N8F7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSMEM1Q8N8F7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LSMEM1Q8N8F7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSMEM1Q8N8F7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LSMEM1Q8N8F7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSMEM1Q8N8F7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LSMEM1Q8N8F7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
LSMEM1Q8N8F7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.8■■□□□ 1.72
LSMEM1Q8N8F7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LSMEM1Q8N8F7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.77■■□□□ 1.72
LSMEM1Q8N8F7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM1Q8N8F7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM1Q8N8F7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSMEM1Q8N8F7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
LSMEM1Q8N8F7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
LSMEM1Q8N8F7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
LSMEM1Q8N8F7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
LSMEM1Q8N8F7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.72■■□□□ 1.71
LSMEM1Q8N8F7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
LSMEM1Q8N8F7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
LSMEM1Q8N8F7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LSMEM1Q8N8F7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LSMEM1Q8N8F7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.67■■□□□ 1.7
LSMEM1Q8N8F7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LSMEM1Q8N8F7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.65■■□□□ 1.7
LSMEM1Q8N8F7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LSMEM1Q8N8F7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LSMEM1Q8N8F7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.63■■□□□ 1.69
LSMEM1Q8N8F7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LSMEM1Q8N8F7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LSMEM1Q8N8F7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LSMEM1Q8N8F7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LSMEM1Q8N8F7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
LSMEM1Q8N8F7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LSMEM1Q8N8F7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LSMEM1Q8N8F7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.59■■□□□ 1.69
LSMEM1Q8N8F7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
LSMEM1Q8N8F7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.58■■□□□ 1.68
LSMEM1Q8N8F7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.58■■□□□ 1.68
LSMEM1Q8N8F7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
LSMEM1Q8N8F7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.57■■□□□ 1.68
LSMEM1Q8N8F7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.56■■□□□ 1.68
LSMEM1Q8N8F7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.56■■□□□ 1.68
LSMEM1Q8N8F7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LSMEM1Q8N8F7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LSMEM1Q8N8F7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
LSMEM1Q8N8F7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LSMEM1Q8N8F7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LSMEM1Q8N8F7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
LSMEM1Q8N8F7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
LSMEM1Q8N8F7 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.49■■□□□ 1.67
LSMEM1Q8N8F7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.48■■□□□ 1.67
LSMEM1Q8N8F7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LSMEM1Q8N8F7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
LSMEM1Q8N8F7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
LSMEM1Q8N8F7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
LSMEM1Q8N8F7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.46■■□□□ 1.67
LSMEM1Q8N8F7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms