Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
C13orf42A0A1B0GVH6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
C13orf42A0A1B0GVH6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
C13orf42A0A1B0GVH6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
C13orf42A0A1B0GVH6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
C13orf42A0A1B0GVH6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
C13orf42A0A1B0GVH6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
C13orf42A0A1B0GVH6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
C13orf42A0A1B0GVH6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.14■■□□□ 1.45
C13orf42A0A1B0GVH6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.09■■□□□ 1.45
C13orf42A0A1B0GVH6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
C13orf42A0A1B0GVH6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
C13orf42A0A1B0GVH6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
C13orf42A0A1B0GVH6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
C13orf42A0A1B0GVH6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
C13orf42A0A1B0GVH6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
C13orf42A0A1B0GVH6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
C13orf42A0A1B0GVH6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
C13orf42A0A1B0GVH6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
C13orf42A0A1B0GVH6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
C13orf42A0A1B0GVH6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
C13orf42A0A1B0GVH6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
C13orf42A0A1B0GVH6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
C13orf42A0A1B0GVH6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
C13orf42A0A1B0GVH6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.9■■□□□ 1.42
C13orf42A0A1B0GVH6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
C13orf42A0A1B0GVH6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
C13orf42A0A1B0GVH6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
C13orf42A0A1B0GVH6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
C13orf42A0A1B0GVH6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
C13orf42A0A1B0GVH6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.78■■□□□ 1.4
C13orf42A0A1B0GVH6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
C13orf42A0A1B0GVH6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 AC145285.7-201ENST00000614819 1539 ntBASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.74■■□□□ 1.39
C13orf42A0A1B0GVH6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
C13orf42A0A1B0GVH6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
C13orf42A0A1B0GVH6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
C13orf42A0A1B0GVH6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
C13orf42A0A1B0GVH6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
C13orf42A0A1B0GVH6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
C13orf42A0A1B0GVH6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.64■■□□□ 1.37
C13orf42A0A1B0GVH6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
C13orf42A0A1B0GVH6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
C13orf42A0A1B0GVH6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
C13orf42A0A1B0GVH6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
C13orf42A0A1B0GVH6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
C13orf42A0A1B0GVH6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.57■■□□□ 1.36
C13orf42A0A1B0GVH6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
C13orf42A0A1B0GVH6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
C13orf42A0A1B0GVH6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C13orf42A0A1B0GVH6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
C13orf42A0A1B0GVH6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.5■■□□□ 1.35
C13orf42A0A1B0GVH6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
C13orf42A0A1B0GVH6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.45■■□□□ 1.35
C13orf42A0A1B0GVH6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C13orf42A0A1B0GVH6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C13orf42A0A1B0GVH6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
C13orf42A0A1B0GVH6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
C13orf42A0A1B0GVH6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
C13orf42A0A1B0GVH6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
C13orf42A0A1B0GVH6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
C13orf42A0A1B0GVH6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
C13orf42A0A1B0GVH6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
C13orf42A0A1B0GVH6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
C13orf42A0A1B0GVH6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
C13orf42A0A1B0GVH6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms