Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
C13orf42A0A1B0GVH6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
C13orf42A0A1B0GVH6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
C13orf42A0A1B0GVH6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
C13orf42A0A1B0GVH6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
C13orf42A0A1B0GVH6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
C13orf42A0A1B0GVH6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
C13orf42A0A1B0GVH6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
C13orf42A0A1B0GVH6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.14■■□□□ 1.45
C13orf42A0A1B0GVH6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.09■■□□□ 1.45
C13orf42A0A1B0GVH6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
C13orf42A0A1B0GVH6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
C13orf42A0A1B0GVH6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
C13orf42A0A1B0GVH6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
C13orf42A0A1B0GVH6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
C13orf42A0A1B0GVH6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
C13orf42A0A1B0GVH6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
C13orf42A0A1B0GVH6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24■■□□□ 1.43
C13orf42A0A1B0GVH6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
C13orf42A0A1B0GVH6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
C13orf42A0A1B0GVH6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
C13orf42A0A1B0GVH6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
C13orf42A0A1B0GVH6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
C13orf42A0A1B0GVH6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
C13orf42A0A1B0GVH6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
C13orf42A0A1B0GVH6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.9■■□□□ 1.42
C13orf42A0A1B0GVH6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
C13orf42A0A1B0GVH6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
C13orf42A0A1B0GVH6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
C13orf42A0A1B0GVH6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
C13orf42A0A1B0GVH6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
C13orf42A0A1B0GVH6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.81■■□□□ 1.4
C13orf42A0A1B0GVH6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
C13orf42A0A1B0GVH6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.78■■□□□ 1.4
C13orf42A0A1B0GVH6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
C13orf42A0A1B0GVH6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
C13orf42A0A1B0GVH6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 AC145285.7-201ENST00000614819 1539 ntBASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
C13orf42A0A1B0GVH6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.74■■□□□ 1.39
C13orf42A0A1B0GVH6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
C13orf42A0A1B0GVH6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
C13orf42A0A1B0GVH6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
C13orf42A0A1B0GVH6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
C13orf42A0A1B0GVH6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
C13orf42A0A1B0GVH6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
C13orf42A0A1B0GVH6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
C13orf42A0A1B0GVH6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
C13orf42A0A1B0GVH6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.64■■□□□ 1.37
C13orf42A0A1B0GVH6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
C13orf42A0A1B0GVH6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
C13orf42A0A1B0GVH6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
C13orf42A0A1B0GVH6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
C13orf42A0A1B0GVH6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
C13orf42A0A1B0GVH6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.57■■□□□ 1.36
C13orf42A0A1B0GVH6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
C13orf42A0A1B0GVH6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
C13orf42A0A1B0GVH6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C13orf42A0A1B0GVH6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
C13orf42A0A1B0GVH6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.5■■□□□ 1.35
C13orf42A0A1B0GVH6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
C13orf42A0A1B0GVH6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.45■■□□□ 1.35
C13orf42A0A1B0GVH6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C13orf42A0A1B0GVH6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C13orf42A0A1B0GVH6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
C13orf42A0A1B0GVH6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
C13orf42A0A1B0GVH6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
C13orf42A0A1B0GVH6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
C13orf42A0A1B0GVH6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
C13orf42A0A1B0GVH6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
C13orf42A0A1B0GVH6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
C13orf42A0A1B0GVH6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
C13orf42A0A1B0GVH6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
C13orf42A0A1B0GVH6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
C13orf42A0A1B0GVH6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
C13orf42A0A1B0GVH6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms