Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.69e-8■■■■□ 24.6
CSTF2P33240 SMARCA1-204ENST00000478420 561 ntTSL 33.5□□□□□ -1.859e-8■■■■□ 24.6
CSTF2P33240 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.97■□□□□ 0.153e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.033e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-210ENST00000430525 524 ntTSL 414.28□□□□□ -0.123e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-217ENST00000452612 746 ntTSL 312.9□□□□□ -0.343e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-204ENST00000424161 556 ntTSL 412.87□□□□□ -0.353e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-211ENST00000430853 564 ntTSL 412.64□□□□□ -0.393e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-203ENST00000419253 846 ntTSL 1 (best)12.2□□□□□ -0.463e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-218ENST00000453632 562 ntTSL 411.92□□□□□ -0.53e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-205ENST00000425112 807 ntTSL 310.19□□□□□ -0.783e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-214ENST00000435348 578 ntTSL 410.01□□□□□ -0.813e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-208ENST00000428818 706 ntTSL 59.1□□□□□ -0.953e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.96□□□□□ -1.143e-7■■■■□ 24.6
CSTF2P33240 TTC28-AS1-220ENST00000454996 837 ntTSL 27.53□□□□□ -1.23e-7■■■■□ 24.6
CSTF2P33240 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.751e-7■■■■□ 24.6
CSTF2P33240 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC9.11□□□□□ -0.951e-7■■■■□ 24.6
CSTF2P33240 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.021e-7■■■■□ 24.6
CSTF2P33240 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.67□□□□□ -1.021e-7■■■■□ 24.6
CSTF2P33240 TBCK-206ENST00000467183 3566 ntTSL 1 (best)8.09□□□□□ -1.111e-7■■■■□ 24.6
CSTF2P33240 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.531e-7■■■■□ 24.6
CSTF2P33240 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)11.36□□□□□ -0.599e-7■■■■□ 24.6
CSTF2P33240 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.651e-6■■■■□ 24.6
CSTF2P33240 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.64□□□□□ -1.031e-6■■■■□ 24.6
CSTF2P33240 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.111e-6■■■■□ 24.6
CSTF2P33240 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC8.49□□□□□ -1.054e-7■■■■□ 24.5
CSTF2P33240 SMARCA1-205ENST00000617310 4291 ntTSL 29.91□□□□□ -0.827e-8■■■■□ 24.5
CSTF2P33240 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -17e-8■■■■□ 24.5
CSTF2P33240 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.047e-8■■■■□ 24.5
CSTF2P33240 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.65□□□□□ -1.182e-7■■■■□ 24.5
CSTF2P33240 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.212e-7■■■■□ 24.5
CSTF2P33240 WDR33-203ENST00000408998 583 ntTSL 419.83■□□□□ 0.773e-11■■■■□ 24.5
CSTF2P33240 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.153e-11■■■■□ 24.5
CSTF2P33240 WDR33-205ENST00000436787 822 ntTSL 513.74□□□□□ -0.213e-11■■■■□ 24.5
CSTF2P33240 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC10.58□□□□□ -0.723e-11■■■■□ 24.5
CSTF2P33240 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC10.04□□□□□ -0.83e-11■■■■□ 24.5
CSTF2P33240 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.75■■□□□ 1.233e-8■■■■□ 24.5
CSTF2P33240 KLF3-AS1-201ENST00000436901 1896 ntTSL 220.47■□□□□ 0.873e-8■■■■□ 24.5
CSTF2P33240 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.07□□□□□ -0.163e-8■■■■□ 24.5
CSTF2P33240 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.07□□□□□ -0.163e-8■■■■□ 24.5
CSTF2P33240 KLF3-AS1-206ENST00000610668 685 ntTSL 211.92□□□□□ -0.53e-8■■■■□ 24.5
CSTF2P33240 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC11.34□□□□□ -0.593e-8■■■■□ 24.5
CSTF2P33240 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.912e-6■■■■□ 24.5
CSTF2P33240 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.12e-6■■■■□ 24.5
CSTF2P33240 GPBP1-206ENST00000513524 529 ntTSL 54.92□□□□□ -1.622e-6■■■■□ 24.5
CSTF2P33240 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.742e-6■■■■□ 24.5
CSTF2P33240 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.792e-6■■■■□ 24.5
CSTF2P33240 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.942e-6■■■■□ 24.5
CSTF2P33240 MYL12A-208ENST00000580353 565 ntTSL 215.41■□□□□ 0.067e-17■■■■□ 24.5
CSTF2P33240 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.647e-17■■■■□ 24.5
CSTF2P33240 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.677e-17■■■■□ 24.5
CSTF2P33240 MYL12A-210ENST00000583449 334 ntTSL 210.32□□□□□ -0.767e-17■■■■□ 24.5
CSTF2P33240 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.857e-17■■■■□ 24.5
CSTF2P33240 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.447e-9■■■■□ 24.5
CSTF2P33240 TOX3-205ENST00000568436 548 ntTSL 319.21■□□□□ 0.676e-7■■■■□ 24.4
CSTF2P33240 TOX3-203ENST00000563091 572 ntTSL 48.32□□□□□ -1.086e-7■■■■□ 24.4
CSTF2P33240 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.812e-6■■■■□ 24.4
CSTF2P33240 RAD51B-208ENST00000479335 1615 ntTSL 1 (best)9.07□□□□□ -0.962e-6■■■■□ 24.4
CSTF2P33240 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.67□□□□□ -1.182e-6■■■■□ 24.4
CSTF2P33240 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.57□□□□□ -1.22e-6■■■■□ 24.4
CSTF2P33240 RAD51B-202ENST00000460526 794 ntTSL 37.04□□□□□ -1.282e-6■■■■□ 24.4
CSTF2P33240 RAD51B-204ENST00000469165 1158 ntTSL 37.04□□□□□ -1.282e-6■■■■□ 24.4
CSTF2P33240 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.28□□□□□ -1.42e-6■■■■□ 24.4
CSTF2P33240 RAD51B-207ENST00000478014 618 ntTSL 36.28□□□□□ -1.42e-6■■■■□ 24.4
CSTF2P33240 RAD51B-219ENST00000554244 669 ntTSL 35.52□□□□□ -1.532e-6■■■■□ 24.4
CSTF2P33240 RAD51B-216ENST00000553595 795 ntTSL 34.82□□□□□ -1.642e-6■■■■□ 24.4
CSTF2P33240 RAD51B-213ENST00000492236 417 ntTSL 33.72□□□□□ -1.812e-6■■■■□ 24.4
CSTF2P33240 RAD51B-214ENST00000497460 546 ntTSL 43.6□□□□□ -1.832e-6■■■■□ 24.4
CSTF2P33240 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.26□□□□□ -1.571e-6■■■■□ 24.4
CSTF2P33240 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.281e-6■■■■□ 24.4
CSTF2P33240 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■■■□ 24.4
CSTF2P33240 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.331e-6■■■■□ 24.4
CSTF2P33240 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.618e-8■■■■□ 24.3
CSTF2P33240 ZNRF1-210ENST00000568844 5331 nt13.27□□□□□ -0.288e-8■■■■□ 24.3
CSTF2P33240 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.432e-6■■■■□ 24.3
CSTF2P33240 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.472e-6■■■■□ 24.3
CSTF2P33240 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.732e-6■■■■□ 24.3
CSTF2P33240 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.52□□□□□ -0.252e-7■■■■□ 24.3
CSTF2P33240 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)12.88□□□□□ -0.352e-7■■■■□ 24.3
CSTF2P33240 FAM169A-207ENST00000514215 5954 ntTSL 1 (best)5.89□□□□□ -1.472e-7■■■■□ 24.3
CSTF2P33240 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.27□□□□□ -1.732e-7■■■■□ 24.3
CSTF2P33240 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.752e-7■■■■□ 24.3
CSTF2P33240 NCOA5-202ENST00000372291 727 ntTSL 324.21■■□□□ 1.476e-7■■■■□ 24.3
CSTF2P33240 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.216e-7■■■■□ 24.3
CSTF2P33240 KLHDC10-202ENST00000463413 503 ntTSL 225.21■■□□□ 1.632e-6■■■■□ 24.3
CSTF2P33240 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.462e-6■■■■□ 24.3
CSTF2P33240 KLHDC10-203ENST00000468226 772 ntTSL 37.06□□□□□ -1.282e-6■■■■□ 24.3
CSTF2P33240 ATXN1-207ENST00000483954 744 ntTSL 35.13□□□□□ -1.594e-7■■■■□ 24.3
CSTF2P33240 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.81e-8■■■■□ 24.2
CSTF2P33240 GMDS-AS1-209ENST00000532124 629 ntTSL 419.46■□□□□ 0.711e-6■■■■□ 24.2
CSTF2P33240 GMDS-AS1-203ENST00000524770 565 ntTSL 319.46■□□□□ 0.711e-6■■■■□ 24.2
CSTF2P33240 NISCH-209ENST00000485765 563 ntTSL 418.6■□□□□ 0.571e-8■■■■□ 24.2
CSTF2P33240 GMDS-AS1-206ENST00000530346 594 ntTSL 417.76■□□□□ 0.431e-6■■■■□ 24.2
CSTF2P33240 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.56■□□□□ 0.241e-6■■■■□ 24.2
CSTF2P33240 NISCH-213ENST00000489895 5350 ntTSL 216.55■□□□□ 0.241e-8■■■■□ 24.2
CSTF2P33240 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.061e-8■■■■□ 24.2
CSTF2P33240 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.161e-8■■■■□ 24.2
CSTF2P33240 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.161e-8■■■■□ 24.2
CSTF2P33240 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.271e-8■■■■□ 24.2
CSTF2P33240 GMDS-AS1-208ENST00000531092 744 ntTSL 313.2□□□□□ -0.31e-6■■■■□ 24.2
Retrieved 100 of 6,735 protein–RNA pairs in 428.4 ms