RNA–Protein interactions for RNA: ENST00000483954.1

ATXN1-207, Transcript of ataxin 1, humanhuman

TSL 3

Gene ATXN1, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-207ENST00000483954 AEBP2Q6ZN18 517 aaPredicted RBP19.46■□□□□ 0.71
ATXN1-207ENST00000483954 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
ATXN1-207ENST00000483954 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
ATXN1-207ENST00000483954 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
ATXN1-207ENST00000483954 FOXD1Q16676 465 aa15.37■□□□□ 0.05
ATXN1-207ENST00000483954 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
ATXN1-207ENST00000483954 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
ATXN1-207ENST00000483954 ADRA2BP18089 450 aa14.62□□□□□ -0.07
ATXN1-207ENST00000483954 PIAS4Q8N2W9 510 aaPredicted RBP14.42□□□□□ -0.1
ATXN1-207ENST00000483954 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
ATXN1-207ENST00000483954 MSH5O43196 834 aa14.22□□□□□ -0.13
ATXN1-207ENST00000483954 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
ATXN1-207ENST00000483954 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
ATXN1-207ENST00000483954 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
ATXN1-207ENST00000483954 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
ATXN1-207ENST00000483954 KCNA4P22459 653 aa13.15□□□□□ -0.3
ATXN1-207ENST00000483954 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
ATXN1-207ENST00000483954 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
ATXN1-207ENST00000483954 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
ATXN1-207ENST00000483954 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
ATXN1-207ENST00000483954 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
ATXN1-207ENST00000483954 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
ATXN1-207ENST00000483954 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
ATXN1-207ENST00000483954 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
ATXN1-207ENST00000483954 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
ATXN1-207ENST00000483954 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
ATXN1-207ENST00000483954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
ATXN1-207ENST00000483954 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
ATXN1-207ENST00000483954 ZBTB22O15209 634 aa12.11□□□□□ -0.47
ATXN1-207ENST00000483954 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
ATXN1-207ENST00000483954 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
ATXN1-207ENST00000483954 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
ATXN1-207ENST00000483954 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
ATXN1-207ENST00000483954 U3KPZ7 1027 aaPredicted RBP12□□□□□ -0.49
ATXN1-207ENST00000483954 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
ATXN1-207ENST00000483954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
ATXN1-207ENST00000483954 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
ATXN1-207ENST00000483954 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
ATXN1-207ENST00000483954 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
ATXN1-207ENST00000483954 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
ATXN1-207ENST00000483954 CAPN15O75808 1086 aa11.66□□□□□ -0.54
ATXN1-207ENST00000483954 APLP2Q06481 763 aa11.65□□□□□ -0.54
ATXN1-207ENST00000483954 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
ATXN1-207ENST00000483954 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
ATXN1-207ENST00000483954 DSG3P32926 999 aa11.53□□□□□ -0.56
ATXN1-207ENST00000483954 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
ATXN1-207ENST00000483954 ABCB7O75027 752 aa11.43□□□□□ -0.58
ATXN1-207ENST00000483954 POLA2Q14181 598 aa11.34□□□□□ -0.59
ATXN1-207ENST00000483954 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
ATXN1-207ENST00000483954 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
ATXN1-207ENST00000483954 FKBP8Q14318 412 aa11□□□□□ -0.65
ATXN1-207ENST00000483954 FBLN2P98095 1184 aa10.99□□□□□ -0.65
ATXN1-207ENST00000483954 POTEHQ6S545 545 aa10.99□□□□□ -0.65
ATXN1-207ENST00000483954 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
ATXN1-207ENST00000483954 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
ATXN1-207ENST00000483954 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
ATXN1-207ENST00000483954 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
ATXN1-207ENST00000483954 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
ATXN1-207ENST00000483954 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
ATXN1-207ENST00000483954 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
ATXN1-207ENST00000483954 PROM2Q8N271 834 aa10.74□□□□□ -0.69
ATXN1-207ENST00000483954 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
ATXN1-207ENST00000483954 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
ATXN1-207ENST00000483954 REM2Q8IYK8 340 aaPredicted RBP10.71□□□□□ -0.69
ATXN1-207ENST00000483954 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
ATXN1-207ENST00000483954 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
ATXN1-207ENST00000483954 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
ATXN1-207ENST00000483954 PABPN1Q86U42 306 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATXN1-207ENST00000483954 SPDYE1Q8NFV5 336 aaPredicted RBP10.54□□□□□ -0.72
ATXN1-207ENST00000483954 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
ATXN1-207ENST00000483954 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
ATXN1-207ENST00000483954 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
ATXN1-207ENST00000483954 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATXN1-207ENST00000483954 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
ATXN1-207ENST00000483954 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
ATXN1-207ENST00000483954 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
ATXN1-207ENST00000483954 RTN4Q9NQC3 1192 aaKnown RBP10.36□□□□□ -0.75
ATXN1-207ENST00000483954 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
ATXN1-207ENST00000483954 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
ATXN1-207ENST00000483954 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
ATXN1-207ENST00000483954 MIER1Q8N108 512 aa10.22□□□□□ -0.77
ATXN1-207ENST00000483954 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
ATXN1-207ENST00000483954 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
ATXN1-207ENST00000483954 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
ATXN1-207ENST00000483954 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
ATXN1-207ENST00000483954 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
ATXN1-207ENST00000483954 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
ATXN1-207ENST00000483954 ZBTB47Q9UFB7 747 aaPredicted RBP10.16□□□□□ -0.78
ATXN1-207ENST00000483954 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
ATXN1-207ENST00000483954 HAX1O00165 279 aa10.14□□□□□ -0.79
ATXN1-207ENST00000483954 MNX1P50219 401 aaPredicted RBP10.1□□□□□ -0.79
ATXN1-207ENST00000483954 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
ATXN1-207ENST00000483954 EVX2Q03828 476 aa10.07□□□□□ -0.8
ATXN1-207ENST00000483954 PKD2Q13563 968 aa10.04□□□□□ -0.8
ATXN1-207ENST00000483954 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATXN1-207ENST00000483954 CD44P16070 742 aaKnown RBP10□□□□□ -0.81
ATXN1-207ENST00000483954 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
ATXN1-207ENST00000483954 NUBP1P53384 320 aa9.97□□□□□ -0.81
ATXN1-207ENST00000483954 GSE1Q14687 1217 aa9.93□□□□□ -0.82
ATXN1-207ENST00000483954 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms