RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
RAD51B-208ENST00000479335 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
RAD51B-208ENST00000479335 AEBP2Q6ZN18 517 aaPredicted RBP18.68■□□□□ 0.58
RAD51B-208ENST00000479335 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
RAD51B-208ENST00000479335 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
RAD51B-208ENST00000479335 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
RAD51B-208ENST00000479335 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
RAD51B-208ENST00000479335 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
RAD51B-208ENST00000479335 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
RAD51B-208ENST00000479335 ABCC9O60706 1549 aa17.87■□□□□ 0.45
RAD51B-208ENST00000479335 NACADO15069 1562 aa17.8■□□□□ 0.44
RAD51B-208ENST00000479335 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
RAD51B-208ENST00000479335 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
RAD51B-208ENST00000479335 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
RAD51B-208ENST00000479335 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
RAD51B-208ENST00000479335 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
RAD51B-208ENST00000479335 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
RAD51B-208ENST00000479335 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
RAD51B-208ENST00000479335 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
RAD51B-208ENST00000479335 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
RAD51B-208ENST00000479335 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
RAD51B-208ENST00000479335 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
RAD51B-208ENST00000479335 WIZO95785 1651 aa16.8■□□□□ 0.28
RAD51B-208ENST00000479335 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
RAD51B-208ENST00000479335 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
RAD51B-208ENST00000479335 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
RAD51B-208ENST00000479335 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
RAD51B-208ENST00000479335 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
RAD51B-208ENST00000479335 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
RAD51B-208ENST00000479335 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
RAD51B-208ENST00000479335 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
RAD51B-208ENST00000479335 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
RAD51B-208ENST00000479335 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
RAD51B-208ENST00000479335 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
RAD51B-208ENST00000479335 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
RAD51B-208ENST00000479335 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
RAD51B-208ENST00000479335 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
RAD51B-208ENST00000479335 CFTRP13569 1480 aa16.08■□□□□ 0.16
RAD51B-208ENST00000479335 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
RAD51B-208ENST00000479335 EEA1Q15075 1411 aa16.01■□□□□ 0.15
RAD51B-208ENST00000479335 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
RAD51B-208ENST00000479335 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
RAD51B-208ENST00000479335 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
RAD51B-208ENST00000479335 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
RAD51B-208ENST00000479335 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
RAD51B-208ENST00000479335 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
RAD51B-208ENST00000479335 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
RAD51B-208ENST00000479335 SOGA1O94964 1423 aa15.89■□□□□ 0.13
RAD51B-208ENST00000479335 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
RAD51B-208ENST00000479335 CUX1P39880 1505 aa15.84■□□□□ 0.13
RAD51B-208ENST00000479335 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
RAD51B-208ENST00000479335 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
RAD51B-208ENST00000479335 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
RAD51B-208ENST00000479335 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
RAD51B-208ENST00000479335 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
RAD51B-208ENST00000479335 KIF21BO75037 1637 aa15.74■□□□□ 0.11
RAD51B-208ENST00000479335 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
RAD51B-208ENST00000479335 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
RAD51B-208ENST00000479335 NESP48681 1621 aa15.72■□□□□ 0.11
RAD51B-208ENST00000479335 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
RAD51B-208ENST00000479335 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
RAD51B-208ENST00000479335 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
RAD51B-208ENST00000479335 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
RAD51B-208ENST00000479335 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
RAD51B-208ENST00000479335 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
RAD51B-208ENST00000479335 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
RAD51B-208ENST00000479335 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
RAD51B-208ENST00000479335 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
RAD51B-208ENST00000479335 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
RAD51B-208ENST00000479335 CUX2O14529 1486 aa15.58■□□□□ 0.08
RAD51B-208ENST00000479335 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
RAD51B-208ENST00000479335 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
RAD51B-208ENST00000479335 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
RAD51B-208ENST00000479335 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
RAD51B-208ENST00000479335 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
RAD51B-208ENST00000479335 IGF1RP08069 1367 aa15.54■□□□□ 0.08
RAD51B-208ENST00000479335 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
RAD51B-208ENST00000479335 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
RAD51B-208ENST00000479335 CLIP1P30622 1438 aa15.47■□□□□ 0.07
RAD51B-208ENST00000479335 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
RAD51B-208ENST00000479335 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
RAD51B-208ENST00000479335 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
RAD51B-208ENST00000479335 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
RAD51B-208ENST00000479335 CUL7Q14999 1698 aa15.4■□□□□ 0.06
RAD51B-208ENST00000479335 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
RAD51B-208ENST00000479335 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
RAD51B-208ENST00000479335 WDR62O43379 1518 aa15.39■□□□□ 0.05
RAD51B-208ENST00000479335 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
RAD51B-208ENST00000479335 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
RAD51B-208ENST00000479335 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
RAD51B-208ENST00000479335 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
RAD51B-208ENST00000479335 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
RAD51B-208ENST00000479335 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
RAD51B-208ENST00000479335 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
RAD51B-208ENST00000479335 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.03
RAD51B-208ENST00000479335 APLP2Q06481 763 aa15.25■□□□□ 0.03
RAD51B-208ENST00000479335 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
RAD51B-208ENST00000479335 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
RAD51B-208ENST00000479335 RANGAP1P46060 587 aaPredicted RBP15.23■□□□□ 0.03
RAD51B-208ENST00000479335 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms