RNA–Protein interactions for RNA: ENST00000469165.6

RAD51B-204, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 1,158 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-204ENST00000469165 AEBP2Q6ZN18 517 aaPredicted RBP31.53■■■□□ 2.64
RAD51B-204ENST00000469165 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
RAD51B-204ENST00000469165 SENP3Q9H4L4 574 aaPredicted RBP26.86■■□□□ 1.89
RAD51B-204ENST00000469165 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
RAD51B-204ENST00000469165 FOXD1Q16676 465 aa25.1■■□□□ 1.61
RAD51B-204ENST00000469165 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.37
RAD51B-204ENST00000469165 MSH5O43196 834 aa23.5■■□□□ 1.35
RAD51B-204ENST00000469165 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
RAD51B-204ENST00000469165 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
RAD51B-204ENST00000469165 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
RAD51B-204ENST00000469165 ADRA2BP18089 450 aa23.25■■□□□ 1.31
RAD51B-204ENST00000469165 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
RAD51B-204ENST00000469165 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
RAD51B-204ENST00000469165 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
RAD51B-204ENST00000469165 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
RAD51B-204ENST00000469165 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
RAD51B-204ENST00000469165 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
RAD51B-204ENST00000469165 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
RAD51B-204ENST00000469165 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
RAD51B-204ENST00000469165 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
RAD51B-204ENST00000469165 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
RAD51B-204ENST00000469165 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
RAD51B-204ENST00000469165 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
RAD51B-204ENST00000469165 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
RAD51B-204ENST00000469165 NPM3O75607 178 aaKnown RBP19.58■□□□□ 0.72
RAD51B-204ENST00000469165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■□□□□ 10.2
RAD51B-204ENST00000469165 KCNA4P22459 653 aa19.05■□□□□ 0.64
RAD51B-204ENST00000469165 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
RAD51B-204ENST00000469165 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
RAD51B-204ENST00000469165 CAPN15O75808 1086 aa18.79■□□□□ 0.6
RAD51B-204ENST00000469165 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
RAD51B-204ENST00000469165 DSG3P32926 999 aa18.75■□□□□ 0.59
RAD51B-204ENST00000469165 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
RAD51B-204ENST00000469165 APLP2Q06481 763 aa18.42■□□□□ 0.54
RAD51B-204ENST00000469165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
RAD51B-204ENST00000469165 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
RAD51B-204ENST00000469165 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
RAD51B-204ENST00000469165 ABCB7O75027 752 aa18.34■□□□□ 0.53
RAD51B-204ENST00000469165 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
RAD51B-204ENST00000469165 POTEHQ6S545 545 aa18.21■□□□□ 0.51
RAD51B-204ENST00000469165 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
RAD51B-204ENST00000469165 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
RAD51B-204ENST00000469165 POLA2Q14181 598 aa17.92■□□□□ 0.46
RAD51B-204ENST00000469165 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
RAD51B-204ENST00000469165 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
RAD51B-204ENST00000469165 ATF5Q9Y2D1 282 aaPredicted RBP17.74■□□□□ 0.43
RAD51B-204ENST00000469165 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
RAD51B-204ENST00000469165 CHRDL2Q6WN34 429 aa17.55■□□□□ 0.4
RAD51B-204ENST00000469165 ZBTB22O15209 634 aa17.52■□□□□ 0.4
RAD51B-204ENST00000469165 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
RAD51B-204ENST00000469165 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
RAD51B-204ENST00000469165 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
RAD51B-204ENST00000469165 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
RAD51B-204ENST00000469165 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
RAD51B-204ENST00000469165 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
RAD51B-204ENST00000469165 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
RAD51B-204ENST00000469165 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
RAD51B-204ENST00000469165 PITPNM1O00562 1244 aa17.08■□□□□ 0.32
RAD51B-204ENST00000469165 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.31
RAD51B-204ENST00000469165 FBLN2P98095 1184 aa16.99■□□□□ 0.31
RAD51B-204ENST00000469165 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
RAD51B-204ENST00000469165 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
RAD51B-204ENST00000469165 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
RAD51B-204ENST00000469165 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
RAD51B-204ENST00000469165 MKRN4PQ13434 485 aaPredicted RBP16.91■□□□□ 0.3
RAD51B-204ENST00000469165 HAX1O00165 279 aa16.85■□□□□ 0.29
RAD51B-204ENST00000469165 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
RAD51B-204ENST00000469165 SSUH2Q9Y2M2 353 aa16.73■□□□□ 0.27
RAD51B-204ENST00000469165 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.27
RAD51B-204ENST00000469165 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
RAD51B-204ENST00000469165 EVX2Q03828 476 aa16.67■□□□□ 0.26
RAD51B-204ENST00000469165 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RAD51B-204ENST00000469165 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAD51B-204ENST00000469165 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
RAD51B-204ENST00000469165 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
RAD51B-204ENST00000469165 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
RAD51B-204ENST00000469165 GABBR2O75899 941 aa16.26■□□□□ 0.19
RAD51B-204ENST00000469165 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
RAD51B-204ENST00000469165 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
RAD51B-204ENST00000469165 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
RAD51B-204ENST00000469165 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
RAD51B-204ENST00000469165 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
RAD51B-204ENST00000469165 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
RAD51B-204ENST00000469165 LHX8Q68G74 356 aa15.93■□□□□ 0.14
RAD51B-204ENST00000469165 CLCN6P51797 869 aa15.89■□□□□ 0.13
RAD51B-204ENST00000469165 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
RAD51B-204ENST00000469165 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
RAD51B-204ENST00000469165 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
RAD51B-204ENST00000469165 DCBLD2Q96PD2 775 aa15.74■□□□□ 0.11
RAD51B-204ENST00000469165 ABCC9O60706 1549 aa15.68■□□□□ 0.1
RAD51B-204ENST00000469165 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
RAD51B-204ENST00000469165 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
RAD51B-204ENST00000469165 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
RAD51B-204ENST00000469165 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
RAD51B-204ENST00000469165 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
RAD51B-204ENST00000469165 PROM2Q8N271 834 aa15.58■□□□□ 0.08
RAD51B-204ENST00000469165 FKBP8Q14318 412 aa15.51■□□□□ 0.07
RAD51B-204ENST00000469165 POTEB2H3BUK9 544 aa15.42■□□□□ 0.06
RAD51B-204ENST00000469165 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
RAD51B-204ENST00000469165 MS4A3Q96HJ5 214 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms