RNA–Protein interactions for RNA: ENST00000553595.5

RAD51B-216, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-216ENST00000553595 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
RAD51B-216ENST00000553595 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
RAD51B-216ENST00000553595 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
RAD51B-216ENST00000553595 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
RAD51B-216ENST00000553595 FOXD1Q16676 465 aa16.46■□□□□ 0.23
RAD51B-216ENST00000553595 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
RAD51B-216ENST00000553595 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
RAD51B-216ENST00000553595 ADRA2BP18089 450 aa15.67■□□□□ 0.1
RAD51B-216ENST00000553595 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
RAD51B-216ENST00000553595 MSH5O43196 834 aa15.22■□□□□ 0.03
RAD51B-216ENST00000553595 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
RAD51B-216ENST00000553595 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
RAD51B-216ENST00000553595 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
RAD51B-216ENST00000553595 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
RAD51B-216ENST00000553595 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
RAD51B-216ENST00000553595 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
RAD51B-216ENST00000553595 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
RAD51B-216ENST00000553595 KCNA4P22459 653 aa13.78□□□□□ -0.2
RAD51B-216ENST00000553595 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
RAD51B-216ENST00000553595 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
RAD51B-216ENST00000553595 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
RAD51B-216ENST00000553595 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
RAD51B-216ENST00000553595 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
RAD51B-216ENST00000553595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■□□□□ 10.2
RAD51B-216ENST00000553595 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
RAD51B-216ENST00000553595 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
RAD51B-216ENST00000553595 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
RAD51B-216ENST00000553595 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
RAD51B-216ENST00000553595 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
RAD51B-216ENST00000553595 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
RAD51B-216ENST00000553595 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
RAD51B-216ENST00000553595 ZBTB22O15209 634 aa12.68□□□□□ -0.38
RAD51B-216ENST00000553595 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
RAD51B-216ENST00000553595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
RAD51B-216ENST00000553595 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
RAD51B-216ENST00000553595 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
RAD51B-216ENST00000553595 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
RAD51B-216ENST00000553595 CAPN15O75808 1086 aa12.51□□□□□ -0.41
RAD51B-216ENST00000553595 APLP2Q06481 763 aa12.49□□□□□ -0.41
RAD51B-216ENST00000553595 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
RAD51B-216ENST00000553595 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
RAD51B-216ENST00000553595 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
RAD51B-216ENST00000553595 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
RAD51B-216ENST00000553595 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
RAD51B-216ENST00000553595 DSG3P32926 999 aa12.35□□□□□ -0.43
RAD51B-216ENST00000553595 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
RAD51B-216ENST00000553595 ABCB7O75027 752 aa12.27□□□□□ -0.45
RAD51B-216ENST00000553595 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
RAD51B-216ENST00000553595 ABCC9O60706 1549 aa12.21□□□□□ -0.45
RAD51B-216ENST00000553595 POLA2Q14181 598 aa12.16□□□□□ -0.46
RAD51B-216ENST00000553595 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
RAD51B-216ENST00000553595 FBLN2P98095 1184 aa11.8□□□□□ -0.52
RAD51B-216ENST00000553595 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
RAD51B-216ENST00000553595 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
RAD51B-216ENST00000553595 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
RAD51B-216ENST00000553595 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
RAD51B-216ENST00000553595 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
RAD51B-216ENST00000553595 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
RAD51B-216ENST00000553595 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
RAD51B-216ENST00000553595 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
RAD51B-216ENST00000553595 NISCHQ9Y2I1 1504 aa11.51□□□□□ -0.57
RAD51B-216ENST00000553595 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
RAD51B-216ENST00000553595 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
RAD51B-216ENST00000553595 POTEHQ6S545 545 aa11.46□□□□□ -0.57
RAD51B-216ENST00000553595 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
RAD51B-216ENST00000553595 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
RAD51B-216ENST00000553595 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
RAD51B-216ENST00000553595 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
RAD51B-216ENST00000553595 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
RAD51B-216ENST00000553595 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
RAD51B-216ENST00000553595 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
RAD51B-216ENST00000553595 FKBP8Q14318 412 aa11.25□□□□□ -0.61
RAD51B-216ENST00000553595 PROM2Q8N271 834 aa11.2□□□□□ -0.62
RAD51B-216ENST00000553595 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAD51B-216ENST00000553595 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
RAD51B-216ENST00000553595 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
RAD51B-216ENST00000553595 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
RAD51B-216ENST00000553595 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
RAD51B-216ENST00000553595 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
RAD51B-216ENST00000553595 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
RAD51B-216ENST00000553595 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
RAD51B-216ENST00000553595 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
RAD51B-216ENST00000553595 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
RAD51B-216ENST00000553595 RB1CC1Q8TDY2 1594 aa10.92□□□□□ -0.66
RAD51B-216ENST00000553595 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
RAD51B-216ENST00000553595 CUX2O14529 1486 aa10.88□□□□□ -0.67
RAD51B-216ENST00000553595 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
RAD51B-216ENST00000553595 HAX1O00165 279 aa10.86□□□□□ -0.67
RAD51B-216ENST00000553595 UNC13AQ9UPW8 1703 aa10.86□□□□□ -0.67
RAD51B-216ENST00000553595 MIER1Q8N108 512 aa10.85□□□□□ -0.67
RAD51B-216ENST00000553595 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
RAD51B-216ENST00000553595 CCDC180Q9P1Z9 1646 aa10.81□□□□□ -0.68
RAD51B-216ENST00000553595 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
RAD51B-216ENST00000553595 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
RAD51B-216ENST00000553595 EVX2Q03828 476 aa10.79□□□□□ -0.68
RAD51B-216ENST00000553595 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
RAD51B-216ENST00000553595 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.68
RAD51B-216ENST00000553595 NPM1P06748 294 aaKnown RBP eCLIP10.75□□□□□ -0.69
RAD51B-216ENST00000553595 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
RAD51B-216ENST00000553595 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms