RNA–Protein interactions for RNA: ENST00000395002.6

FAM13A-202, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM13A, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-202ENST00000395002 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
FAM13A-202ENST00000395002 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
FAM13A-202ENST00000395002 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
FAM13A-202ENST00000395002 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
FAM13A-202ENST00000395002 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
FAM13A-202ENST00000395002 APLP2Q06481 763 aa13.78□□□□□ -0.2
FAM13A-202ENST00000395002 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
FAM13A-202ENST00000395002 ABCC9O60706 1549 aa13.73□□□□□ -0.21
FAM13A-202ENST00000395002 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
FAM13A-202ENST00000395002 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
FAM13A-202ENST00000395002 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.26
FAM13A-202ENST00000395002 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
FAM13A-202ENST00000395002 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
FAM13A-202ENST00000395002 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
FAM13A-202ENST00000395002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
FAM13A-202ENST00000395002 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
FAM13A-202ENST00000395002 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
FAM13A-202ENST00000395002 FBLN2P98095 1184 aa13.07□□□□□ -0.32
FAM13A-202ENST00000395002 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
FAM13A-202ENST00000395002 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
FAM13A-202ENST00000395002 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
FAM13A-202ENST00000395002 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
FAM13A-202ENST00000395002 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
FAM13A-202ENST00000395002 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
FAM13A-202ENST00000395002 ITGAEP38570 1179 aa12.74□□□□□ -0.37
FAM13A-202ENST00000395002 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
FAM13A-202ENST00000395002 ESF1Q9H501 851 aaKnown RBP12.65□□□□□ -0.38
FAM13A-202ENST00000395002 NACADO15069 1562 aa12.62□□□□□ -0.39
FAM13A-202ENST00000395002 CDK11AQ9UQ88 783 aaPredicted RBP12.61□□□□□ -0.39
FAM13A-202ENST00000395002 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
FAM13A-202ENST00000395002 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
FAM13A-202ENST00000395002 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
FAM13A-202ENST00000395002 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
FAM13A-202ENST00000395002 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
FAM13A-202ENST00000395002 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
FAM13A-202ENST00000395002 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
FAM13A-202ENST00000395002 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
FAM13A-202ENST00000395002 BCANQ96GW7 911 aa12.52□□□□□ -0.41
FAM13A-202ENST00000395002 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
FAM13A-202ENST00000395002 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
FAM13A-202ENST00000395002 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
FAM13A-202ENST00000395002 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
FAM13A-202ENST00000395002 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
FAM13A-202ENST00000395002 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
FAM13A-202ENST00000395002 ZNF777Q9ULD5 760 aaPredicted RBP12.44□□□□□ -0.42
FAM13A-202ENST00000395002 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
FAM13A-202ENST00000395002 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
FAM13A-202ENST00000395002 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
FAM13A-202ENST00000395002 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
FAM13A-202ENST00000395002 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
FAM13A-202ENST00000395002 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
FAM13A-202ENST00000395002 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
FAM13A-202ENST00000395002 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
FAM13A-202ENST00000395002 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
FAM13A-202ENST00000395002 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
FAM13A-202ENST00000395002 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
FAM13A-202ENST00000395002 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
FAM13A-202ENST00000395002 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
FAM13A-202ENST00000395002 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
FAM13A-202ENST00000395002 NEFLP07196 543 aa12.19□□□□□ -0.46
FAM13A-202ENST00000395002 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
FAM13A-202ENST00000395002 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
FAM13A-202ENST00000395002 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
FAM13A-202ENST00000395002 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
FAM13A-202ENST00000395002 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
FAM13A-202ENST00000395002 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
FAM13A-202ENST00000395002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.472e-9■■■■■ 29.2
FAM13A-202ENST00000395002 NEFMP07197 916 aa12.11□□□□□ -0.47
FAM13A-202ENST00000395002 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
FAM13A-202ENST00000395002 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
FAM13A-202ENST00000395002 WRNQ14191 1432 aaPredicted RBP eCLIP12.08□□□□□ -0.48
FAM13A-202ENST00000395002 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
FAM13A-202ENST00000395002 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
FAM13A-202ENST00000395002 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
FAM13A-202ENST00000395002 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
FAM13A-202ENST00000395002 CHIC2Q9UKJ5 165 aa12.01□□□□□ -0.49
FAM13A-202ENST00000395002 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
FAM13A-202ENST00000395002 EEA1Q15075 1411 aa11.99□□□□□ -0.49
FAM13A-202ENST00000395002 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
FAM13A-202ENST00000395002 CFDP1Q9UEE9 299 aaPredicted RBP11.98□□□□□ -0.49
FAM13A-202ENST00000395002 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
FAM13A-202ENST00000395002 YTHDC1Q96MU7 727 aaKnown RBP11.97□□□□□ -0.49
FAM13A-202ENST00000395002 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
FAM13A-202ENST00000395002 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
FAM13A-202ENST00000395002 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
FAM13A-202ENST00000395002 CUX2O14529 1486 aa11.93□□□□□ -0.5
FAM13A-202ENST00000395002 SOGA1O94964 1423 aa11.92□□□□□ -0.5
FAM13A-202ENST00000395002 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
FAM13A-202ENST00000395002 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
FAM13A-202ENST00000395002 CLIP1P30622 1438 aa11.91□□□□□ -0.5
FAM13A-202ENST00000395002 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
FAM13A-202ENST00000395002 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
FAM13A-202ENST00000395002 MLECQ14165 292 aa11.9□□□□□ -0.5
FAM13A-202ENST00000395002 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.5
FAM13A-202ENST00000395002 CYB5RLQ6IPT4 315 aa11.9□□□□□ -0.5
FAM13A-202ENST00000395002 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
FAM13A-202ENST00000395002 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
FAM13A-202ENST00000395002 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
FAM13A-202ENST00000395002 A0A0G2JS52 829 aa11.87□□□□□ -0.51
FAM13A-202ENST00000395002 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms