RNA–Protein interactions for RNA: ENST00000513524.5

GPBP1-206, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 5

Gene GPBP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-206ENST00000513524 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
GPBP1-206ENST00000513524 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
GPBP1-206ENST00000513524 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
GPBP1-206ENST00000513524 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
GPBP1-206ENST00000513524 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
GPBP1-206ENST00000513524 FOXD1Q16676 465 aa21.9■■□□□ 1.1
GPBP1-206ENST00000513524 ADRA2BP18089 450 aa21.14■□□□□ 0.97
GPBP1-206ENST00000513524 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
GPBP1-206ENST00000513524 PIAS4Q8N2W9 510 aaPredicted RBP20.73■□□□□ 0.91
GPBP1-206ENST00000513524 MSH5O43196 834 aa20.22■□□□□ 0.83
GPBP1-206ENST00000513524 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
GPBP1-206ENST00000513524 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
GPBP1-206ENST00000513524 KCNA4P22459 653 aa19.2■□□□□ 0.66
GPBP1-206ENST00000513524 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
GPBP1-206ENST00000513524 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
GPBP1-206ENST00000513524 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
GPBP1-206ENST00000513524 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
GPBP1-206ENST00000513524 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
GPBP1-206ENST00000513524 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
GPBP1-206ENST00000513524 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
GPBP1-206ENST00000513524 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
GPBP1-206ENST00000513524 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
GPBP1-206ENST00000513524 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
GPBP1-206ENST00000513524 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
GPBP1-206ENST00000513524 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
GPBP1-206ENST00000513524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.422e-7■□□□□ 9.9
GPBP1-206ENST00000513524 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
GPBP1-206ENST00000513524 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
GPBP1-206ENST00000513524 ZBTB22O15209 634 aa17.62■□□□□ 0.41
GPBP1-206ENST00000513524 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
GPBP1-206ENST00000513524 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
GPBP1-206ENST00000513524 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
GPBP1-206ENST00000513524 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
GPBP1-206ENST00000513524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
GPBP1-206ENST00000513524 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
GPBP1-206ENST00000513524 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
GPBP1-206ENST00000513524 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
GPBP1-206ENST00000513524 APLP2Q06481 763 aa17.07■□□□□ 0.32
GPBP1-206ENST00000513524 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
GPBP1-206ENST00000513524 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
GPBP1-206ENST00000513524 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
GPBP1-206ENST00000513524 CAPN15O75808 1086 aa16.85■□□□□ 0.29
GPBP1-206ENST00000513524 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
GPBP1-206ENST00000513524 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
GPBP1-206ENST00000513524 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
GPBP1-206ENST00000513524 ABCB7O75027 752 aa16.5■□□□□ 0.23
GPBP1-206ENST00000513524 POLA2Q14181 598 aa16.5■□□□□ 0.23
GPBP1-206ENST00000513524 DSG3P32926 999 aa16.49■□□□□ 0.23
GPBP1-206ENST00000513524 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
GPBP1-206ENST00000513524 FBLN2P98095 1184 aa16.25■□□□□ 0.19
GPBP1-206ENST00000513524 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
GPBP1-206ENST00000513524 FKBP8Q14318 412 aa15.98■□□□□ 0.15
GPBP1-206ENST00000513524 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
GPBP1-206ENST00000513524 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
GPBP1-206ENST00000513524 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
GPBP1-206ENST00000513524 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
GPBP1-206ENST00000513524 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
GPBP1-206ENST00000513524 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
GPBP1-206ENST00000513524 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
GPBP1-206ENST00000513524 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
GPBP1-206ENST00000513524 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
GPBP1-206ENST00000513524 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
GPBP1-206ENST00000513524 PROM2Q8N271 834 aa15.55■□□□□ 0.08
GPBP1-206ENST00000513524 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
GPBP1-206ENST00000513524 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
GPBP1-206ENST00000513524 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
GPBP1-206ENST00000513524 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
GPBP1-206ENST00000513524 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
GPBP1-206ENST00000513524 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
GPBP1-206ENST00000513524 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
GPBP1-206ENST00000513524 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
GPBP1-206ENST00000513524 MIER1Q8N108 512 aa15.08■□□□□ 0
GPBP1-206ENST00000513524 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
GPBP1-206ENST00000513524 PLEKHG5O94827 1062 aa15.05■□□□□ -0
GPBP1-206ENST00000513524 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
GPBP1-206ENST00000513524 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
GPBP1-206ENST00000513524 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
GPBP1-206ENST00000513524 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
GPBP1-206ENST00000513524 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
GPBP1-206ENST00000513524 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
GPBP1-206ENST00000513524 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
GPBP1-206ENST00000513524 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
GPBP1-206ENST00000513524 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
GPBP1-206ENST00000513524 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
GPBP1-206ENST00000513524 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
GPBP1-206ENST00000513524 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
GPBP1-206ENST00000513524 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
GPBP1-206ENST00000513524 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.05
GPBP1-206ENST00000513524 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
GPBP1-206ENST00000513524 NUBP1P53384 320 aa14.62□□□□□ -0.07
GPBP1-206ENST00000513524 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
GPBP1-206ENST00000513524 FAM212AQ96EL1 285 aa14.57□□□□□ -0.08
GPBP1-206ENST00000513524 DCAF8Q5TAQ9 597 aa14.55□□□□□ -0.08
GPBP1-206ENST00000513524 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
GPBP1-206ENST00000513524 GSE1Q14687 1217 aa14.54□□□□□ -0.08
GPBP1-206ENST00000513524 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
GPBP1-206ENST00000513524 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
GPBP1-206ENST00000513524 POTEHQ6S545 545 aa14.48□□□□□ -0.09
GPBP1-206ENST00000513524 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
GPBP1-206ENST00000513524 PKD2Q13563 968 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms