RNA–Protein interactions for RNA: ENST00000488612.5

RAD51B-212, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best) BASIC

Gene RAD51B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-212ENST00000488612 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
RAD51B-212ENST00000488612 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
RAD51B-212ENST00000488612 ABCC9O60706 1549 aa16.28■□□□□ 0.2
RAD51B-212ENST00000488612 ZCCHC6Q5VYS8 1495 aaKnown RBP16.02■□□□□ 0.15
RAD51B-212ENST00000488612 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
RAD51B-212ENST00000488612 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
RAD51B-212ENST00000488612 NACADO15069 1562 aa15.77■□□□□ 0.12
RAD51B-212ENST00000488612 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
RAD51B-212ENST00000488612 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
RAD51B-212ENST00000488612 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
RAD51B-212ENST00000488612 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
RAD51B-212ENST00000488612 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
RAD51B-212ENST00000488612 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.05
RAD51B-212ENST00000488612 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
RAD51B-212ENST00000488612 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
RAD51B-212ENST00000488612 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
RAD51B-212ENST00000488612 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
RAD51B-212ENST00000488612 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
RAD51B-212ENST00000488612 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
RAD51B-212ENST00000488612 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
RAD51B-212ENST00000488612 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
RAD51B-212ENST00000488612 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
RAD51B-212ENST00000488612 WIZO95785 1651 aa14.7□□□□□ -0.06
RAD51B-212ENST00000488612 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
RAD51B-212ENST00000488612 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
RAD51B-212ENST00000488612 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
RAD51B-212ENST00000488612 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
RAD51B-212ENST00000488612 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
RAD51B-212ENST00000488612 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
RAD51B-212ENST00000488612 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
RAD51B-212ENST00000488612 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.09
RAD51B-212ENST00000488612 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
RAD51B-212ENST00000488612 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
RAD51B-212ENST00000488612 NESP48681 1621 aa14.22□□□□□ -0.13
RAD51B-212ENST00000488612 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
RAD51B-212ENST00000488612 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
RAD51B-212ENST00000488612 CFTRP13569 1480 aa14.14□□□□□ -0.15
RAD51B-212ENST00000488612 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
RAD51B-212ENST00000488612 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
RAD51B-212ENST00000488612 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
RAD51B-212ENST00000488612 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
RAD51B-212ENST00000488612 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
RAD51B-212ENST00000488612 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
RAD51B-212ENST00000488612 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
RAD51B-212ENST00000488612 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
RAD51B-212ENST00000488612 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
RAD51B-212ENST00000488612 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
RAD51B-212ENST00000488612 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
RAD51B-212ENST00000488612 CUX1P39880 1505 aa13.87□□□□□ -0.19
RAD51B-212ENST00000488612 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
RAD51B-212ENST00000488612 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.19
RAD51B-212ENST00000488612 WDR62O43379 1518 aa13.83□□□□□ -0.19
RAD51B-212ENST00000488612 TOPBP1Q92547 1522 aa13.83□□□□□ -0.19
RAD51B-212ENST00000488612 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
RAD51B-212ENST00000488612 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
RAD51B-212ENST00000488612 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
RAD51B-212ENST00000488612 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
RAD51B-212ENST00000488612 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
RAD51B-212ENST00000488612 CUX2O14529 1486 aa13.73□□□□□ -0.21
RAD51B-212ENST00000488612 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
RAD51B-212ENST00000488612 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
RAD51B-212ENST00000488612 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
RAD51B-212ENST00000488612 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
RAD51B-212ENST00000488612 SOGA1O94964 1423 aa13.65□□□□□ -0.22
RAD51B-212ENST00000488612 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
RAD51B-212ENST00000488612 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
RAD51B-212ENST00000488612 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
RAD51B-212ENST00000488612 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
RAD51B-212ENST00000488612 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
RAD51B-212ENST00000488612 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
RAD51B-212ENST00000488612 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAD51B-212ENST00000488612 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
RAD51B-212ENST00000488612 PBRM1Q86U86 1689 aa13.54□□□□□ -0.24
RAD51B-212ENST00000488612 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
RAD51B-212ENST00000488612 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
RAD51B-212ENST00000488612 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
RAD51B-212ENST00000488612 IGF1RP08069 1367 aa13.44□□□□□ -0.26
RAD51B-212ENST00000488612 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
RAD51B-212ENST00000488612 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
RAD51B-212ENST00000488612 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
RAD51B-212ENST00000488612 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
RAD51B-212ENST00000488612 EEA1Q15075 1411 aa13.39□□□□□ -0.27
RAD51B-212ENST00000488612 CHD1O14646 1710 aa13.39□□□□□ -0.27
RAD51B-212ENST00000488612 CUL7Q14999 1698 aa13.39□□□□□ -0.27
RAD51B-212ENST00000488612 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
RAD51B-212ENST00000488612 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
RAD51B-212ENST00000488612 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
RAD51B-212ENST00000488612 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
RAD51B-212ENST00000488612 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
RAD51B-212ENST00000488612 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.27
RAD51B-212ENST00000488612 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
RAD51B-212ENST00000488612 KIF21BO75037 1637 aa13.32□□□□□ -0.28
RAD51B-212ENST00000488612 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
RAD51B-212ENST00000488612 FBLN2P98095 1184 aa13.31□□□□□ -0.28
RAD51B-212ENST00000488612 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
RAD51B-212ENST00000488612 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
RAD51B-212ENST00000488612 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
RAD51B-212ENST00000488612 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
RAD51B-212ENST00000488612 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
RAD51B-212ENST00000488612 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms