RNA–Protein interactions for RNA: ENST00000497460.5

RAD51B-214, Transcript of RAD51 paralog B, humanhuman

TSL 4

Gene RAD51B, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-214ENST00000497460 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
RAD51B-214ENST00000497460 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
RAD51B-214ENST00000497460 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
RAD51B-214ENST00000497460 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
RAD51B-214ENST00000497460 FOXD1Q16676 465 aa20.39■□□□□ 0.85
RAD51B-214ENST00000497460 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
RAD51B-214ENST00000497460 ADRA2BP18089 450 aa19.38■□□□□ 0.69
RAD51B-214ENST00000497460 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
RAD51B-214ENST00000497460 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
RAD51B-214ENST00000497460 MSH5O43196 834 aa18.95■□□□□ 0.62
RAD51B-214ENST00000497460 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
RAD51B-214ENST00000497460 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
RAD51B-214ENST00000497460 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
RAD51B-214ENST00000497460 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
RAD51B-214ENST00000497460 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
RAD51B-214ENST00000497460 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
RAD51B-214ENST00000497460 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
RAD51B-214ENST00000497460 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
RAD51B-214ENST00000497460 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
RAD51B-214ENST00000497460 KCNA4P22459 653 aa16.95■□□□□ 0.3
RAD51B-214ENST00000497460 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
RAD51B-214ENST00000497460 DCAF8L1A6NGE4 600 aa16.8■□□□□ 0.28
RAD51B-214ENST00000497460 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
RAD51B-214ENST00000497460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■□□□□ 10.2
RAD51B-214ENST00000497460 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
RAD51B-214ENST00000497460 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
RAD51B-214ENST00000497460 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
RAD51B-214ENST00000497460 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
RAD51B-214ENST00000497460 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
RAD51B-214ENST00000497460 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
RAD51B-214ENST00000497460 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
RAD51B-214ENST00000497460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
RAD51B-214ENST00000497460 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
RAD51B-214ENST00000497460 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
RAD51B-214ENST00000497460 APLP2Q06481 763 aa15.58■□□□□ 0.08
RAD51B-214ENST00000497460 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
RAD51B-214ENST00000497460 ZBTB22O15209 634 aa15.56■□□□□ 0.08
RAD51B-214ENST00000497460 CAPN15O75808 1086 aa15.55■□□□□ 0.08
RAD51B-214ENST00000497460 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
RAD51B-214ENST00000497460 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
RAD51B-214ENST00000497460 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
RAD51B-214ENST00000497460 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
RAD51B-214ENST00000497460 DSG3P32926 999 aa15.3■□□□□ 0.04
RAD51B-214ENST00000497460 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
RAD51B-214ENST00000497460 ABCB7O75027 752 aa15.21■□□□□ 0.03
RAD51B-214ENST00000497460 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
RAD51B-214ENST00000497460 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
RAD51B-214ENST00000497460 POLA2Q14181 598 aa15.06■□□□□ 0
RAD51B-214ENST00000497460 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
RAD51B-214ENST00000497460 FBLN2P98095 1184 aa14.65□□□□□ -0.06
RAD51B-214ENST00000497460 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
RAD51B-214ENST00000497460 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
RAD51B-214ENST00000497460 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
RAD51B-214ENST00000497460 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
RAD51B-214ENST00000497460 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
RAD51B-214ENST00000497460 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
RAD51B-214ENST00000497460 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
RAD51B-214ENST00000497460 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
RAD51B-214ENST00000497460 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
RAD51B-214ENST00000497460 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
RAD51B-214ENST00000497460 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
RAD51B-214ENST00000497460 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
RAD51B-214ENST00000497460 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAD51B-214ENST00000497460 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
RAD51B-214ENST00000497460 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
RAD51B-214ENST00000497460 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
RAD51B-214ENST00000497460 POTEHQ6S545 545 aa14□□□□□ -0.17
RAD51B-214ENST00000497460 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
RAD51B-214ENST00000497460 FKBP8Q14318 412 aa13.85□□□□□ -0.19
RAD51B-214ENST00000497460 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAD51B-214ENST00000497460 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
RAD51B-214ENST00000497460 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
RAD51B-214ENST00000497460 PROM2Q8N271 834 aa13.77□□□□□ -0.21
RAD51B-214ENST00000497460 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
RAD51B-214ENST00000497460 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
RAD51B-214ENST00000497460 HAX1O00165 279 aa13.54□□□□□ -0.24
RAD51B-214ENST00000497460 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
RAD51B-214ENST00000497460 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
RAD51B-214ENST00000497460 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
RAD51B-214ENST00000497460 MIER1Q8N108 512 aa13.43□□□□□ -0.26
RAD51B-214ENST00000497460 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
RAD51B-214ENST00000497460 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
RAD51B-214ENST00000497460 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
RAD51B-214ENST00000497460 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAD51B-214ENST00000497460 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
RAD51B-214ENST00000497460 EVX2Q03828 476 aa13.34□□□□□ -0.27
RAD51B-214ENST00000497460 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
RAD51B-214ENST00000497460 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
RAD51B-214ENST00000497460 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
RAD51B-214ENST00000497460 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
RAD51B-214ENST00000497460 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
RAD51B-214ENST00000497460 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
RAD51B-214ENST00000497460 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
RAD51B-214ENST00000497460 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
RAD51B-214ENST00000497460 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
RAD51B-214ENST00000497460 GABBR2O75899 941 aa13.1□□□□□ -0.31
RAD51B-214ENST00000497460 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
RAD51B-214ENST00000497460 CLCN6P51797 869 aa13.06□□□□□ -0.32
RAD51B-214ENST00000497460 NUBP1P53384 320 aa13.06□□□□□ -0.32
RAD51B-214ENST00000497460 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms