RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-219ENST00000554244 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
RAD51B-219ENST00000554244 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
RAD51B-219ENST00000554244 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
RAD51B-219ENST00000554244 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
RAD51B-219ENST00000554244 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
RAD51B-219ENST00000554244 FOXD1Q16676 465 aa13.17□□□□□ -0.3
RAD51B-219ENST00000554244 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
RAD51B-219ENST00000554244 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
RAD51B-219ENST00000554244 ADRA2BP18089 450 aa12.72□□□□□ -0.37
RAD51B-219ENST00000554244 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
RAD51B-219ENST00000554244 MSH5O43196 834 aa12.06□□□□□ -0.48
RAD51B-219ENST00000554244 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
RAD51B-219ENST00000554244 SCAF1Q9H7N4 1312 aaKnown RBP11.57□□□□□ -0.56
RAD51B-219ENST00000554244 KCNA4P22459 653 aa11.56□□□□□ -0.56
RAD51B-219ENST00000554244 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
RAD51B-219ENST00000554244 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
RAD51B-219ENST00000554244 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
RAD51B-219ENST00000554244 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
RAD51B-219ENST00000554244 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
RAD51B-219ENST00000554244 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
RAD51B-219ENST00000554244 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
RAD51B-219ENST00000554244 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
RAD51B-219ENST00000554244 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
RAD51B-219ENST00000554244 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
RAD51B-219ENST00000554244 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
RAD51B-219ENST00000554244 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
RAD51B-219ENST00000554244 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
RAD51B-219ENST00000554244 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
RAD51B-219ENST00000554244 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
RAD51B-219ENST00000554244 ZBTB22O15209 634 aa10.66□□□□□ -0.7
RAD51B-219ENST00000554244 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
RAD51B-219ENST00000554244 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
RAD51B-219ENST00000554244 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
RAD51B-219ENST00000554244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■□□□□ 10.2
RAD51B-219ENST00000554244 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
RAD51B-219ENST00000554244 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
RAD51B-219ENST00000554244 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
RAD51B-219ENST00000554244 MYO15BQ96JP2 1530 aa10.39□□□□□ -0.75
RAD51B-219ENST00000554244 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
RAD51B-219ENST00000554244 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
RAD51B-219ENST00000554244 ABCC9O60706 1549 aa10.28□□□□□ -0.76
RAD51B-219ENST00000554244 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
RAD51B-219ENST00000554244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
RAD51B-219ENST00000554244 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
RAD51B-219ENST00000554244 NACADO15069 1562 aa10.25□□□□□ -0.77
RAD51B-219ENST00000554244 SUPT5HO00267 1087 aaKnown RBP10.24□□□□□ -0.77
RAD51B-219ENST00000554244 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
RAD51B-219ENST00000554244 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-219ENST00000554244 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.77
RAD51B-219ENST00000554244 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
RAD51B-219ENST00000554244 SPINK5Q9NQ38 1064 aaPredicted RBP10.14□□□□□ -0.79
RAD51B-219ENST00000554244 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
RAD51B-219ENST00000554244 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
RAD51B-219ENST00000554244 APLP2Q06481 763 aa10.11□□□□□ -0.79
RAD51B-219ENST00000554244 CAPN15O75808 1086 aa10.05□□□□□ -0.8
RAD51B-219ENST00000554244 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
RAD51B-219ENST00000554244 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-219ENST00000554244 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
RAD51B-219ENST00000554244 ZNF219Q9P2Y4 722 aaPredicted RBP9.99□□□□□ -0.81
RAD51B-219ENST00000554244 WIZO95785 1651 aa9.93□□□□□ -0.82
RAD51B-219ENST00000554244 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
RAD51B-219ENST00000554244 MROH2BQ7Z745 1585 aa9.91□□□□□ -0.82
RAD51B-219ENST00000554244 DSG3P32926 999 aa9.9□□□□□ -0.82
RAD51B-219ENST00000554244 POLA2Q14181 598 aa9.9□□□□□ -0.82
RAD51B-219ENST00000554244 CECR2Q9BXF3 1484 aa9.9□□□□□ -0.83
RAD51B-219ENST00000554244 ABCB7O75027 752 aa9.88□□□□□ -0.83
RAD51B-219ENST00000554244 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
RAD51B-219ENST00000554244 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
RAD51B-219ENST00000554244 BICRAQ9NZM4 1560 aa9.82□□□□□ -0.84
RAD51B-219ENST00000554244 TOP2AP11388 1531 aaKnown RBP9.8□□□□□ -0.84
RAD51B-219ENST00000554244 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
RAD51B-219ENST00000554244 SMARCA2P51531 1590 aa9.72□□□□□ -0.85
RAD51B-219ENST00000554244 PEG3Q9GZU2 1588 aa9.72□□□□□ -0.85
RAD51B-219ENST00000554244 FBLN2P98095 1184 aa9.67□□□□□ -0.86
RAD51B-219ENST00000554244 ZBTB12Q9Y330 459 aaPredicted RBP9.67□□□□□ -0.86
RAD51B-219ENST00000554244 CCDC88BA6NC98 1476 aa9.63□□□□□ -0.87
RAD51B-219ENST00000554244 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
RAD51B-219ENST00000554244 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
RAD51B-219ENST00000554244 FKBP8Q14318 412 aa9.57□□□□□ -0.88
RAD51B-219ENST00000554244 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
RAD51B-219ENST00000554244 PRDM2Q13029 1718 aa9.54□□□□□ -0.88
RAD51B-219ENST00000554244 ATAD2BQ9ULI0 1458 aa9.53□□□□□ -0.88
RAD51B-219ENST00000554244 OSCARQ8IYS5 282 aa9.53□□□□□ -0.88
RAD51B-219ENST00000554244 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAD51B-219ENST00000554244 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
RAD51B-219ENST00000554244 SPDYE4A6NLX3 237 aa9.5□□□□□ -0.89
RAD51B-219ENST00000554244 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
RAD51B-219ENST00000554244 SYNJ1O43426 1573 aa9.46□□□□□ -0.9
RAD51B-219ENST00000554244 EEA1Q15075 1411 aa9.45□□□□□ -0.9
RAD51B-219ENST00000554244 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
RAD51B-219ENST00000554244 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
RAD51B-219ENST00000554244 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
RAD51B-219ENST00000554244 HRCP23327 699 aa9.44□□□□□ -0.9
RAD51B-219ENST00000554244 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
RAD51B-219ENST00000554244 FAM9AQ8IZU1 332 aaPredicted RBP9.43□□□□□ -0.9
RAD51B-219ENST00000554244 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
RAD51B-219ENST00000554244 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
RAD51B-219ENST00000554244 KIF21BO75037 1637 aa9.41□□□□□ -0.9
RAD51B-219ENST00000554244 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
RAD51B-219ENST00000554244 TOP2BQ02880 1626 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms