Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
APPP05067 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
APPP05067 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
APPP05067 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
APPP05067 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.97■■■□□ 2.39
APPP05067 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.97■■■□□ 2.39
APPP05067 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
APPP05067 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
APPP05067 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
APPP05067 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
APPP05067 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
APPP05067 AC142086.6-201ENST00000621154 1765 ntBASIC29.95■■■□□ 2.39
APPP05067 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
APPP05067 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
APPP05067 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.95■■■□□ 2.39
APPP05067 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
APPP05067 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.95■■■□□ 2.38
APPP05067 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.95■■■□□ 2.38
APPP05067 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.95■■■□□ 2.38
APPP05067 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
APPP05067 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
APPP05067 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
APPP05067 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
APPP05067 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.93■■■□□ 2.38
APPP05067 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
APPP05067 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
APPP05067 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
APPP05067 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
APPP05067 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
APPP05067 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
APPP05067 AC022413.1-201ENST00000624602 984 ntBASIC29.91■■■□□ 2.38
APPP05067 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
APPP05067 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.89■■■□□ 2.38
APPP05067 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
APPP05067 LINC01003-201ENST00000564834 1764 ntBASIC29.89■■■□□ 2.38
APPP05067 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.88■■■□□ 2.37
APPP05067 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APPP05067 GPX1-201ENST00000419349 1106 ntBASIC29.88■■■□□ 2.37
APPP05067 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
APPP05067 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.87■■■□□ 2.37
APPP05067 HSD17B1P1-201ENST00000590052 955 ntBASIC29.87■■■□□ 2.37
APPP05067 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
APPP05067 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
APPP05067 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
APPP05067 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
APPP05067 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.86■■■□□ 2.37
APPP05067 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.86■■■□□ 2.37
APPP05067 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
APPP05067 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.86■■■□□ 2.37
APPP05067 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
APPP05067 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
APPP05067 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
APPP05067 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
APPP05067 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
APPP05067 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.85■■■□□ 2.37
APPP05067 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
APPP05067 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
APPP05067 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
APPP05067 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
APPP05067 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
APPP05067 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
APPP05067 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.83■■■□□ 2.37
APPP05067 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.83■■■□□ 2.37
APPP05067 AC126177.7-201ENST00000547904 679 ntBASIC29.83■■■□□ 2.37
APPP05067 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
APPP05067 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.82■■■□□ 2.37
APPP05067 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.82■■■□□ 2.36
APPP05067 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
APPP05067 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.82■■■□□ 2.36
APPP05067 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
APPP05067 AL359258.2-201ENST00000564063 1566 ntBASIC29.81■■■□□ 2.36
APPP05067 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.81■■■□□ 2.36
APPP05067 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.81■■■□□ 2.36
APPP05067 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
APPP05067 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
APPP05067 BX255925.1-201ENST00000566954 1854 ntBASIC29.8■■■□□ 2.36
APPP05067 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
APPP05067 AC060814.1-201ENST00000554326 538 ntBASIC29.8■■■□□ 2.36
APPP05067 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
APPP05067 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.79■■■□□ 2.36
APPP05067 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
APPP05067 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
APPP05067 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
APPP05067 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
APPP05067 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
APPP05067 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
APPP05067 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
APPP05067 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.77■■■□□ 2.36
APPP05067 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
APPP05067 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
APPP05067 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.76■■■□□ 2.35
APPP05067 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.75■■■□□ 2.35
APPP05067 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.75■■■□□ 2.35
APPP05067 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
APPP05067 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
APPP05067 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.73■■■□□ 2.35
APPP05067 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
APPP05067 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
APPP05067 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
APPP05067 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms