RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 NISCHQ9Y2I1 1504 aa62.07■■■■■ 7.53
PTPMT1-203ENST00000426530 CCDC180Q9P1Z9 1646 aa55.53■■■■■ 6.48
PTPMT1-203ENST00000426530 ABCC9O60706 1549 aa55.19■■■■■ 6.43
PTPMT1-203ENST00000426530 RB1CC1Q8TDY2 1594 aa52.64■■■■■ 6.02
PTPMT1-203ENST00000426530 NACADO15069 1562 aa52.34■■■■■ 5.97
PTPMT1-203ENST00000426530 DCAF8L2P0C7V8 631 aa52.24■■■■■ 5.95
PTPMT1-203ENST00000426530 MYO15BQ96JP2 1530 aa51.69■■■■■ 5.87
PTPMT1-203ENST00000426530 UNC13AQ9UPW8 1703 aa51.58■■■■■ 5.85
PTPMT1-203ENST00000426530 ZCCHC6Q5VYS8 1495 aaKnown RBP51.55■■■■■ 5.84
PTPMT1-203ENST00000426530 PABPN1Q86U42 306 aaKnown RBP eCLIP51.43■■■■■ 5.82
PTPMT1-203ENST00000426530 DNAJC5BQ9UF47 199 aa51.35■■■■■ 5.81
PTPMT1-203ENST00000426530 DCAF1Q9Y4B6 1507 aa51.22■■■■■ 5.79
PTPMT1-203ENST00000426530 BICRAQ9NZM4 1560 aa51.15■■■■■ 5.78
PTPMT1-203ENST00000426530 SCRIBQ14160 1630 aa50.73■■■■■ 5.71
PTPMT1-203ENST00000426530 SHROOM4Q9ULL8 1493 aa50.34■■■■■ 5.65
PTPMT1-203ENST00000426530 CC2D2AQ9P2K1 1620 aa49.85■■■■■ 5.57
PTPMT1-203ENST00000426530 EIF4G1Q04637 1599 aaKnown RBP49.84■■■■■ 5.57
PTPMT1-203ENST00000426530 CECR2Q9BXF3 1484 aa49.61■■■■■ 5.53
PTPMT1-203ENST00000426530 SMARCA4P51532 1647 aa48.38■■■■■ 5.34
PTPMT1-203ENST00000426530 NCAPD3P42695 1498 aa48.29■■■■■ 5.32
PTPMT1-203ENST00000426530 ATAD2BQ9ULI0 1458 aa48.26■■■■■ 5.32
PTPMT1-203ENST00000426530 BAZ1AQ9NRL2 1556 aaPredicted RBP48.14■■■■■ 5.3
PTPMT1-203ENST00000426530 SMARCA2P51531 1590 aa48.13■■■■■ 5.3
PTPMT1-203ENST00000426530 HMGXB3Q12766 1538 aa48.02■■■■■ 5.28
PTPMT1-203ENST00000426530 MROH2BQ7Z745 1585 aa47.89■■■■■ 5.26
PTPMT1-203ENST00000426530 BAZ1BQ9UIG0 1483 aaKnown RBP47.84■■■■■ 5.25
PTPMT1-203ENST00000426530 PEG3Q9GZU2 1588 aa47.83■■■■■ 5.25
PTPMT1-203ENST00000426530 ERCC6Q03468 1493 aa47.58■■■■■ 5.21
PTPMT1-203ENST00000426530 NESP48681 1621 aa47.55■■■■■ 5.2
PTPMT1-203ENST00000426530 WIZO95785 1651 aa47.38■■■■■ 5.18
PTPMT1-203ENST00000426530 CUX2O14529 1486 aa47.28■■■■■ 5.16
PTPMT1-203ENST00000426530 LAMC3Q9Y6N6 1575 aa47.19■■■■■ 5.14
PTPMT1-203ENST00000426530 RSF1Q96T23 1441 aaPredicted RBP47■■■■■ 5.11
PTPMT1-203ENST00000426530 KIF21AQ7Z4S6 1674 aa46.98■■■■■ 5.11
PTPMT1-203ENST00000426530 THOC2Q8NI27 1593 aaKnown RBP46.97■■■■■ 5.11
PTPMT1-203ENST00000426530 PDS5BQ9NTI5 1447 aa46.86■■■■■ 5.09
PTPMT1-203ENST00000426530 CADPSQ9ULU8 1353 aa46.86■■■■■ 5.09
PTPMT1-203ENST00000426530 TOP2AP11388 1531 aaKnown RBP46.74■■■■■ 5.07
PTPMT1-203ENST00000426530 DNAJC5Q9H3Z4 198 aa46.74■■■■■ 5.07
PTPMT1-203ENST00000426530 MRC2Q9UBG0 1479 aa46.5■■■■■ 5.03
PTPMT1-203ENST00000426530 CFTRP13569 1480 aa46.43■■■■■ 5.02
PTPMT1-203ENST00000426530 CEP164Q9UPV0 1460 aa46.4■■■■■ 5.02
PTPMT1-203ENST00000426530 FANCD2Q9BXW9 1451 aa46.39■■■■■ 5.02
PTPMT1-203ENST00000426530 WDR62O43379 1518 aa46.38■■■■■ 5.01
PTPMT1-203ENST00000426530 CCDC88BA6NC98 1476 aa46.2■■■■■ 4.99
PTPMT1-203ENST00000426530 PRDM2Q13029 1718 aa46.11■■■■■ 4.97
PTPMT1-203ENST00000426530 URB2Q14146 1524 aaKnown RBP46.01■■■■■ 4.96
PTPMT1-203ENST00000426530 TOPBP1Q92547 1522 aa45.57■■■■■ 4.89
PTPMT1-203ENST00000426530 DNMBPQ6XZF7 1577 aa45.44■■■■■ 4.86
PTPMT1-203ENST00000426530 IFT140Q96RY7 1462 aa45.42■■■■■ 4.86
PTPMT1-203ENST00000426530 ZNF608Q9ULD9 1512 aaPredicted RBP45.39■■■■■ 4.86
PTPMT1-203ENST00000426530 ABCC8Q09428 1581 aa45.38■■■■■ 4.86
PTPMT1-203ENST00000426530 SUPT5HO00267 1087 aaKnown RBP45.28■■■■■ 4.84
PTPMT1-203ENST00000426530 EIF4G3O43432 1585 aaKnown RBP45.19■■■■■ 4.82
PTPMT1-203ENST00000426530 OSCARQ8IYS5 282 aa45.15■■■■■ 4.82
PTPMT1-203ENST00000426530 TARBP1Q13395 1621 aaKnown RBP45.15■■■■■ 4.82
PTPMT1-203ENST00000426530 POLA1P09884 1462 aaPredicted RBP45.13■■■■■ 4.82
PTPMT1-203ENST00000426530 AQRO60306 1485 aaKnown RBP eCLIP45■■■■■ 4.798e-7■■■■□ 24
PTPMT1-203ENST00000426530 RAD54L2Q9Y4B4 1467 aa44.99■■■■■ 4.79
PTPMT1-203ENST00000426530 TRIM41Q8WV44 630 aa44.99■■■■■ 4.79
PTPMT1-203ENST00000426530 CUX1P39880 1505 aa44.96■■■■■ 4.79
PTPMT1-203ENST00000426530 FGD5Q6ZNL6 1462 aa44.93■■■■■ 4.78
PTPMT1-203ENST00000426530 SOGA1O94964 1423 aa44.89■■■■■ 4.78
PTPMT1-203ENST00000426530 CHD1O14646 1710 aa44.81■■■■■ 4.76
PTPMT1-203ENST00000426530 TDRD9Q8NDG6 1382 aaKnown RBP44.8■■■■■ 4.76
PTPMT1-203ENST00000426530 RIMBP3CA6NJZ7 1639 aa44.67■■■■■ 4.74
PTPMT1-203ENST00000426530 RIMBP3BA6NNM3 1639 aa44.67■■■■■ 4.74
PTPMT1-203ENST00000426530 RIMBP3Q9UFD9 1639 aa44.67■■■■■ 4.74
PTPMT1-203ENST00000426530 WDR97A6NE52 1622 aa44.63■■■■■ 4.73
PTPMT1-203ENST00000426530 FBLN2P98095 1184 aa44.61■■■■■ 4.73
PTPMT1-203ENST00000426530 SNAPC4Q5SXM2 1469 aa44.59■■■■■ 4.73
PTPMT1-203ENST00000426530 ARHGEF11O15085 1522 aa44.54■■■■■ 4.72
PTPMT1-203ENST00000426530 GRIN2BQ13224 1484 aa44.46■■■■■ 4.71
PTPMT1-203ENST00000426530 PBRM1Q86U86 1689 aa44.43■■■■■ 4.7
PTPMT1-203ENST00000426530 MAGI1Q96QZ7 1491 aaPredicted RBP44.4■■■■■ 4.7
PTPMT1-203ENST00000426530 ABCA10Q8WWZ4 1543 aa44.39■■■■■ 4.7
PTPMT1-203ENST00000426530 GAPVD1Q14C86 1478 aa44.37■■■■■ 4.69
PTPMT1-203ENST00000426530 BIVM-ERCC5R4GMW8 1640 aa44.36■■■■■ 4.69
PTPMT1-203ENST00000426530 SYNJ1O43426 1573 aa44.36■■■■■ 4.69
PTPMT1-203ENST00000426530 ABCA5Q8WWZ7 1642 aa44.35■■■■■ 4.69
PTPMT1-203ENST00000426530 TOP2BQ02880 1626 aa44.34■■■■■ 4.69
PTPMT1-203ENST00000426530 WRNQ14191 1432 aaPredicted RBP eCLIP44.33■■■■■ 4.69
PTPMT1-203ENST00000426530 CHMP7Q8WUX9 453 aaPredicted RBP44.3■■■■■ 4.68
PTPMT1-203ENST00000426530 SYNJ2O15056 1496 aa44.27■■■■■ 4.68
PTPMT1-203ENST00000426530 CLASP1Q7Z460 1538 aa44.23■■■■■ 4.67
PTPMT1-203ENST00000426530 ARAP1Q96P48 1450 aa44.15■■■■■ 4.66
PTPMT1-203ENST00000426530 CYB5RLQ6IPT4 315 aa44.14■■■■■ 4.66
PTPMT1-203ENST00000426530 ADAMTS12P58397 1594 aa44■■■■■ 4.63
PTPMT1-203ENST00000426530 GRIN2AQ12879 1464 aa43.92■■■■■ 4.62
PTPMT1-203ENST00000426530 ERICH3Q5RHP9 1530 aa43.83■■■■■ 4.61
PTPMT1-203ENST00000426530 CEP170Q5SW79 1584 aa43.8■■■■■ 4.6
PTPMT1-203ENST00000426530 FHAD1B1AJZ9 1412 aa43.8■■■■■ 4.6
PTPMT1-203ENST00000426530 NUP160Q12769 1436 aa43.73■■■■■ 4.59
PTPMT1-203ENST00000426530 ERCC6L2Q5T890 1561 aa43.65■■■■■ 4.58
PTPMT1-203ENST00000426530 TRHP20396 242 aaPredicted RBP43.53■■■■■ 4.56
PTPMT1-203ENST00000426530 SHROOM2Q13796 1616 aa43.52■■■■■ 4.56
PTPMT1-203ENST00000426530 KIF27Q86VH2 1401 aa43.43■■■■■ 4.54
PTPMT1-203ENST00000426530 RUSC2Q8N2Y8 1516 aa43.38■■■■■ 4.53
PTPMT1-203ENST00000426530 IGF1RP08069 1367 aa43.35■■■■■ 4.53
PTPMT1-203ENST00000426530 CUL7Q14999 1698 aa43.33■■■■■ 4.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms