RNA–Protein interactions for RNA: ENST00000620467.4

MED25-213, Transcript of mediator complex subunit 25, humanhuman

TSL 1 (best) BASIC

Gene MED25, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED25-213ENST00000620467 NISCHQ9Y2I1 1504 aa60.3■■■■■ 7.24
MED25-213ENST00000620467 CCDC180Q9P1Z9 1646 aa53.39■■■■■ 6.14
MED25-213ENST00000620467 ABCC9O60706 1549 aa52.07■■■■■ 5.93
MED25-213ENST00000620467 ZCCHC6Q5VYS8 1495 aaKnown RBP50.3■■■■■ 5.64
MED25-213ENST00000620467 DCAF8L2P0C7V8 631 aa50.21■■■■■ 5.63
MED25-213ENST00000620467 NACADO15069 1562 aa50.13■■■■■ 5.61
MED25-213ENST00000620467 RB1CC1Q8TDY2 1594 aa50.1■■■■■ 5.61
MED25-213ENST00000620467 MYO15BQ96JP2 1530 aa49.91■■■■■ 5.58
MED25-213ENST00000620467 DCAF1Q9Y4B6 1507 aa49.85■■■■■ 5.57
MED25-213ENST00000620467 UNC13AQ9UPW8 1703 aa49.09■■■■■ 5.45
MED25-213ENST00000620467 SCRIBQ14160 1630 aa48.84■■■■■ 5.41
MED25-213ENST00000620467 PABPN1Q86U42 306 aaKnown RBP eCLIP48.75■■■■■ 5.39
MED25-213ENST00000620467 BICRAQ9NZM4 1560 aa48.73■■■■■ 5.39
MED25-213ENST00000620467 SHROOM4Q9ULL8 1493 aa48.04■■■■■ 5.28
MED25-213ENST00000620467 DNAJC5BQ9UF47 199 aa47.65■■■■■ 5.22
MED25-213ENST00000620467 EIF4G1Q04637 1599 aaKnown RBP47.35■■■■■ 5.17
MED25-213ENST00000620467 CC2D2AQ9P2K1 1620 aa47.09■■■■■ 5.13
MED25-213ENST00000620467 CECR2Q9BXF3 1484 aa47.03■■■■■ 5.12
MED25-213ENST00000620467 SMARCA4P51532 1647 aa46.72■■■■■ 5.07
MED25-213ENST00000620467 BAZ1AQ9NRL2 1556 aaPredicted RBP46.64■■■■■ 5.06
MED25-213ENST00000620467 MROH2BQ7Z745 1585 aa46.54■■■■■ 5.04
MED25-213ENST00000620467 ATAD2BQ9ULI0 1458 aa46.41■■■■■ 5.02
MED25-213ENST00000620467 NCAPD3P42695 1498 aa46.3■■■■■ 5
MED25-213ENST00000620467 SMARCA2P51531 1590 aa46.27■■■■■ 5
MED25-213ENST00000620467 PEG3Q9GZU2 1588 aa46.24■■■■■ 4.99
MED25-213ENST00000620467 RSF1Q96T23 1441 aaPredicted RBP46.09■■■■■ 4.97
MED25-213ENST00000620467 HMGXB3Q12766 1538 aa46.08■■■■■ 4.97
MED25-213ENST00000620467 WIZO95785 1651 aa46.04■■■■■ 4.96
MED25-213ENST00000620467 BAZ1BQ9UIG0 1483 aaKnown RBP45.99■■■■■ 4.95
MED25-213ENST00000620467 TOP2AP11388 1531 aaKnown RBP45.51■■■■■ 4.88
MED25-213ENST00000620467 NESP48681 1621 aa45.2■■■■■ 4.83
MED25-213ENST00000620467 SUPT5HO00267 1087 aaKnown RBP45.11■■■■■ 4.81
MED25-213ENST00000620467 CCDC88BA6NC98 1476 aa45.02■■■■■ 4.8
MED25-213ENST00000620467 LAMC3Q9Y6N6 1575 aa44.98■■■■■ 4.79
MED25-213ENST00000620467 CADPSQ9ULU8 1353 aa44.96■■■■■ 4.79
MED25-213ENST00000620467 CFTRP13569 1480 aa44.78■■■■■ 4.76
MED25-213ENST00000620467 ERCC6Q03468 1493 aa44.76■■■■■ 4.76
MED25-213ENST00000620467 PDS5BQ9NTI5 1447 aa44.65■■■■■ 4.74
MED25-213ENST00000620467 KIF21AQ7Z4S6 1674 aa44.61■■■■■ 4.73
MED25-213ENST00000620467 FANCD2Q9BXW9 1451 aa44.46■■■■■ 4.71
MED25-213ENST00000620467 PRDM2Q13029 1718 aa44.41■■■■■ 4.7
MED25-213ENST00000620467 THOC2Q8NI27 1593 aaKnown RBP44.39■■■■■ 4.7
MED25-213ENST00000620467 CEP164Q9UPV0 1460 aa44.34■■■■■ 4.69
MED25-213ENST00000620467 MRC2Q9UBG0 1479 aa44.24■■■■■ 4.67
MED25-213ENST00000620467 CUX2O14529 1486 aa44.17■■■■■ 4.66
MED25-213ENST00000620467 WDR62O43379 1518 aa44.1■■■■■ 4.65
MED25-213ENST00000620467 URB2Q14146 1524 aaKnown RBP44.06■■■■■ 4.64
MED25-213ENST00000620467 TOPBP1Q92547 1522 aa43.8■■■■■ 4.6
MED25-213ENST00000620467 DNMBPQ6XZF7 1577 aa43.75■■■■■ 4.59
MED25-213ENST00000620467 ABCC8Q09428 1581 aa43.67■■■■■ 4.58
MED25-213ENST00000620467 CUX1P39880 1505 aa43.63■■■■■ 4.58
MED25-213ENST00000620467 POLA1P09884 1462 aaPredicted RBP43.45■■■■■ 4.55
MED25-213ENST00000620467 FGD5Q6ZNL6 1462 aa43.39■■■■■ 4.54
MED25-213ENST00000620467 IFT140Q96RY7 1462 aa43.39■■■■■ 4.54
MED25-213ENST00000620467 WRNQ14191 1432 aaPredicted RBP eCLIP43.39■■■■■ 4.54
MED25-213ENST00000620467 SYNJ1O43426 1573 aa43.34■■■■■ 4.53
MED25-213ENST00000620467 TARBP1Q13395 1621 aaKnown RBP43.32■■■■■ 4.53
MED25-213ENST00000620467 RAD54L2Q9Y4B4 1467 aa43.32■■■■■ 4.52
MED25-213ENST00000620467 ZNF608Q9ULD9 1512 aaPredicted RBP43.3■■■■■ 4.52
MED25-213ENST00000620467 TOP2BQ02880 1626 aa43.27■■■■■ 4.52
MED25-213ENST00000620467 BIVM-ERCC5R4GMW8 1640 aa43.26■■■■■ 4.52
MED25-213ENST00000620467 SOGA1O94964 1423 aa43.24■■■■■ 4.51
MED25-213ENST00000620467 EIF4G3O43432 1585 aaKnown RBP43.07■■■■■ 4.48
MED25-213ENST00000620467 AQRO60306 1485 aaKnown RBP eCLIP43.06■■■■■ 4.487e-10■■■■■ 41.9
MED25-213ENST00000620467 WDR97A6NE52 1622 aa43.03■■■■■ 4.48
MED25-213ENST00000620467 TDRD9Q8NDG6 1382 aaKnown RBP43.03■■■■■ 4.48
MED25-213ENST00000620467 ABCA10Q8WWZ4 1543 aa42.97■■■■■ 4.47
MED25-213ENST00000620467 ABCA5Q8WWZ7 1642 aa42.79■■■■■ 4.44
MED25-213ENST00000620467 GAPVD1Q14C86 1478 aa42.74■■■■■ 4.43
MED25-213ENST00000620467 GRIN2BQ13224 1484 aa42.68■■■■■ 4.42
MED25-213ENST00000620467 PBRM1Q86U86 1689 aa42.65■■■■■ 4.42
MED25-213ENST00000620467 SNAPC4Q5SXM2 1469 aa42.64■■■■■ 4.42
MED25-213ENST00000620467 DNAJC5Q9H3Z4 198 aa42.53■■■■■ 4.4
MED25-213ENST00000620467 MAGI1Q96QZ7 1491 aaPredicted RBP42.52■■■■■ 4.4
MED25-213ENST00000620467 TRIM41Q8WV44 630 aa42.52■■■■■ 4.4
MED25-213ENST00000620467 CHD1O14646 1710 aa42.48■■■■■ 4.39
MED25-213ENST00000620467 ERICH3Q5RHP9 1530 aa42.41■■■■■ 4.38
MED25-213ENST00000620467 KIF27Q86VH2 1401 aa42.41■■■■■ 4.38
MED25-213ENST00000620467 FBLN2P98095 1184 aa42.39■■■■■ 4.38
MED25-213ENST00000620467 OSCARQ8IYS5 282 aa42.39■■■■■ 4.38
MED25-213ENST00000620467 SYNJ2O15056 1496 aa42.38■■■■■ 4.38
MED25-213ENST00000620467 ADAMTS12P58397 1594 aa42.36■■■■■ 4.37
MED25-213ENST00000620467 CHIC1Q5VXU3 224 aa42.32■■■■■ 4.37
MED25-213ENST00000620467 RUSC2Q8N2Y8 1516 aa42.3■■■■■ 4.36
MED25-213ENST00000620467 CHMP7Q8WUX9 453 aaPredicted RBP42.3■■■■■ 4.36
MED25-213ENST00000620467 IGF1RP08069 1367 aa42.29■■■■■ 4.36
MED25-213ENST00000620467 FHAD1B1AJZ9 1412 aa42.25■■■■■ 4.35
MED25-213ENST00000620467 GRIN2AQ12879 1464 aa42.17■■■■■ 4.34
MED25-213ENST00000620467 CUL7Q14999 1698 aa42.06■■■■■ 4.32
MED25-213ENST00000620467 CLASP1Q7Z460 1538 aa42.04■■■■■ 4.32
MED25-213ENST00000620467 CARMIL1Q5VZK9 1371 aa42.01■■■■■ 4.31
MED25-213ENST00000620467 CEP170Q5SW79 1584 aa42■■■■■ 4.31
MED25-213ENST00000620467 NUP160Q12769 1436 aa41.99■■■■■ 4.31
MED25-213ENST00000620467 ARHGEF11O15085 1522 aa41.78■■■■■ 4.28
MED25-213ENST00000620467 RAPGEF2Q9Y4G8 1499 aa41.77■■■■■ 4.28
MED25-213ENST00000620467 RIMBP3CA6NJZ7 1639 aa41.77■■■■■ 4.28
MED25-213ENST00000620467 RIMBP3BA6NNM3 1639 aa41.77■■■■■ 4.28
MED25-213ENST00000620467 RIMBP3Q9UFD9 1639 aa41.77■■■■■ 4.28
MED25-213ENST00000620467 PRXQ9BXM0 1461 aa41.75■■■■■ 4.27
MED25-213ENST00000620467 EEA1Q15075 1411 aa41.75■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms