RNA–Protein interactions for RNA: ENST00000366510.3

SCCPDH-201, Transcript of saccharopine dehydrogenase (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCCPDH, Length 2,503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCCPDH-201ENST00000366510 NISCHQ9Y2I1 1504 aa54.07■■■■■ 6.25
SCCPDH-201ENST00000366510 CCDC180Q9P1Z9 1646 aa46.18■■■■■ 4.98
SCCPDH-201ENST00000366510 SHROOM4Q9ULL8 1493 aa45.82■■■■■ 4.93
SCCPDH-201ENST00000366510 ZCCHC6Q5VYS8 1495 aaKnown RBP45.61■■■■■ 4.89
SCCPDH-201ENST00000366510 DCAF8L2P0C7V8 631 aa45.16■■■■■ 4.82
SCCPDH-201ENST00000366510 SUPT5HO00267 1087 aaKnown RBP44.63■■■■■ 4.74
SCCPDH-201ENST00000366510 DCAF1Q9Y4B6 1507 aa44.28■■■■■ 4.68
SCCPDH-201ENST00000366510 ABCC9O60706 1549 aa43.45■■■■■ 4.55
SCCPDH-201ENST00000366510 SCRIBQ14160 1630 aa43.32■■■■■ 4.53
SCCPDH-201ENST00000366510 MYO15BQ96JP2 1530 aa43.2■■■■■ 4.51
SCCPDH-201ENST00000366510 CHIC1Q5VXU3 224 aa43.04■■■■■ 4.48
SCCPDH-201ENST00000366510 NACADO15069 1562 aa42.85■■■■■ 4.45
SCCPDH-201ENST00000366510 RSF1Q96T23 1441 aaPredicted RBP42.59■■■■■ 4.41
SCCPDH-201ENST00000366510 RB1CC1Q8TDY2 1594 aa42.3■■■■■ 4.36
SCCPDH-201ENST00000366510 CECR2Q9BXF3 1484 aa42.29■■■■■ 4.36
SCCPDH-201ENST00000366510 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
SCCPDH-201ENST00000366510 LOC105371045A0A1W2PR82 267 aa41.81■■■■■ 4.28
SCCPDH-201ENST00000366510 WIZO95785 1651 aa41.8■■■■■ 4.28
SCCPDH-201ENST00000366510 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
SCCPDH-201ENST00000366510 TRIM41Q8WV44 630 aa41.56■■■■■ 4.24
SCCPDH-201ENST00000366510 BAZ1AQ9NRL2 1556 aaPredicted RBP41.55■■■■■ 4.24
SCCPDH-201ENST00000366510 PABPN1Q86U42 306 aaKnown RBP eCLIP41.47■■■■■ 4.23
SCCPDH-201ENST00000366510 SMARCA4P51532 1647 aa41.3■■■■■ 4.2
SCCPDH-201ENST00000366510 FAM9AQ8IZU1 332 aaPredicted RBP41.29■■■■■ 4.2
SCCPDH-201ENST00000366510 BICRAQ9NZM4 1560 aa41.22■■■■■ 4.19
SCCPDH-201ENST00000366510 PCGF6Q9BYE7 350 aa41.13■■■■■ 4.18
SCCPDH-201ENST00000366510 TOP2AP11388 1531 aaKnown RBP41.08■■■■■ 4.17
SCCPDH-201ENST00000366510 EHMT2Q96KQ7 1210 aa41.03■■■■■ 4.16
SCCPDH-201ENST00000366510 CCDC88BA6NC98 1476 aa40.94■■■■■ 4.14
SCCPDH-201ENST00000366510 EIF4G1Q04637 1599 aaKnown RBP40.91■■■■■ 4.14
SCCPDH-201ENST00000366510 SMARCA2P51531 1590 aa40.86■■■■■ 4.13
SCCPDH-201ENST00000366510 ABCC8Q09428 1581 aa40.69■■■■■ 4.1
SCCPDH-201ENST00000366510 HRCP23327 699 aa40.62■■■■■ 4.09
SCCPDH-201ENST00000366510 PEG3Q9GZU2 1588 aa40.48■■■■■ 4.07
SCCPDH-201ENST00000366510 ATAD2BQ9ULI0 1458 aa40.41■■■■■ 4.06
SCCPDH-201ENST00000366510 TRIM26Q12899 539 aaPredicted RBP40.39■■■■■ 4.06
SCCPDH-201ENST00000366510 BAZ1BQ9UIG0 1483 aaKnown RBP40.27■■■■■ 4.04
SCCPDH-201ENST00000366510 SOGA1O94964 1423 aa40.18■■■■■ 4.02
SCCPDH-201ENST00000366510 RUSC2Q8N2Y8 1516 aa40.03■■■■■ 4
SCCPDH-201ENST00000366510 PPARGC1BQ86YN6 1023 aaKnown RBP40.03■■■■■ 4
SCCPDH-201ENST00000366510 WRNQ14191 1432 aaPredicted RBP eCLIP40.02■■■■■ 4
SCCPDH-201ENST00000366510 SYNJ1O43426 1573 aa39.87■■■■□ 3.97
SCCPDH-201ENST00000366510 CSRNP3Q8WYN3 585 aa39.86■■■■□ 3.97
SCCPDH-201ENST00000366510 EEA1Q15075 1411 aa39.73■■■■□ 3.95
SCCPDH-201ENST00000366510 UBTFP17480 764 aaKnown RBP39.69■■■■□ 3.94
SCCPDH-201ENST00000366510 NCAPD3P42695 1498 aa39.69■■■■□ 3.94
SCCPDH-201ENST00000366510 CEP162Q5TB80 1403 aa39.67■■■■□ 3.94
SCCPDH-201ENST00000366510 HMGXB3Q12766 1538 aa39.61■■■■□ 3.93
SCCPDH-201ENST00000366510 TNIKQ9UKE5 1360 aa39.6■■■■□ 3.93
SCCPDH-201ENST00000366510 TTBK1Q5TCY1 1321 aaPredicted RBP39.53■■■■□ 3.92
SCCPDH-201ENST00000366510 GOLGA3Q08378 1498 aa39.5■■■■□ 3.91
SCCPDH-201ENST00000366510 TOP2BQ02880 1626 aa39.37■■■■□ 3.89
SCCPDH-201ENST00000366510 CEP164Q9UPV0 1460 aa39.33■■■■□ 3.89
SCCPDH-201ENST00000366510 KIF21BO75037 1637 aa39.25■■■■□ 3.87
SCCPDH-201ENST00000366510 CFTRP13569 1480 aa39.22■■■■□ 3.87
SCCPDH-201ENST00000366510 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
SCCPDH-201ENST00000366510 RAPGEF2Q9Y4G8 1499 aa39.21■■■■□ 3.87
SCCPDH-201ENST00000366510 RANGAP1P46060 587 aaPredicted RBP39.18■■■■□ 3.86
SCCPDH-201ENST00000366510 CUX1P39880 1505 aa39.18■■■■□ 3.86
SCCPDH-201ENST00000366510 ZEB1P37275 1124 aaPredicted RBP39.13■■■■□ 3.86
SCCPDH-201ENST00000366510 CC2D2AQ9P2K1 1620 aa39.06■■■■□ 3.84
SCCPDH-201ENST00000366510 CLIP1P30622 1438 aa39.06■■■■□ 3.84
SCCPDH-201ENST00000366510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.03■■■■□ 3.84
SCCPDH-201ENST00000366510 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
SCCPDH-201ENST00000366510 PRXQ9BXM0 1461 aa38.84■■■■□ 3.81
SCCPDH-201ENST00000366510 CCER1Q8TC90 406 aaPredicted RBP38.83■■■■□ 3.81
SCCPDH-201ENST00000366510 KIF27Q86VH2 1401 aa38.81■■■■□ 3.8
SCCPDH-201ENST00000366510 PRDM2Q13029 1718 aa38.8■■■■□ 3.8
SCCPDH-201ENST00000366510 VPS8Q8N3P4 1428 aa38.78■■■■□ 3.8
SCCPDH-201ENST00000366510 ERICH3Q5RHP9 1530 aa38.72■■■■□ 3.79
SCCPDH-201ENST00000366510 CUX2O14529 1486 aa38.62■■■■□ 3.77
SCCPDH-201ENST00000366510 APLP2Q06481 763 aa38.61■■■■□ 3.77
SCCPDH-201ENST00000366510 FGD5Q6ZNL6 1462 aa38.58■■■■□ 3.77
SCCPDH-201ENST00000366510 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
SCCPDH-201ENST00000366510 NESP48681 1621 aa38.55■■■■□ 3.76
SCCPDH-201ENST00000366510 ARAP1Q96P48 1450 aa38.51■■■■□ 3.75
SCCPDH-201ENST00000366510 HNRNPUL2Q1KMD3 747 aaKnown RBP38.49■■■■□ 3.75
SCCPDH-201ENST00000366510 IGF1RP08069 1367 aa38.48■■■■□ 3.75
SCCPDH-201ENST00000366510 DNAJC5BQ9UF47 199 aa38.41■■■■□ 3.74
SCCPDH-201ENST00000366510 RAD54L2Q9Y4B4 1467 aa38.31■■■■□ 3.72
SCCPDH-201ENST00000366510 CARMIL1Q5VZK9 1371 aa38.31■■■■□ 3.72
SCCPDH-201ENST00000366510 KANK4Q5T7N3 995 aaPredicted RBP38.29■■■■□ 3.72
SCCPDH-201ENST00000366510 ARHGAP35Q9NRY4 1499 aa38.28■■■■□ 3.72
SCCPDH-201ENST00000366510 TOPBP1Q92547 1522 aa38.24■■■■□ 3.71
SCCPDH-201ENST00000366510 DNMBPQ6XZF7 1577 aa38.24■■■■□ 3.71
SCCPDH-201ENST00000366510 POLA1P09884 1462 aaPredicted RBP38.2■■■■□ 3.71
SCCPDH-201ENST00000366510 LAMC3Q9Y6N6 1575 aa38.06■■■■□ 3.68
SCCPDH-201ENST00000366510 ABCA10Q8WWZ4 1543 aa38.06■■■■□ 3.68
SCCPDH-201ENST00000366510 URB2Q14146 1524 aaKnown RBP38.05■■■■□ 3.68
SCCPDH-201ENST00000366510 P3H3Q8IVL6 736 aa38.01■■■■□ 3.67
SCCPDH-201ENST00000366510 TDRD9Q8NDG6 1382 aaKnown RBP37.89■■■■□ 3.66
SCCPDH-201ENST00000366510 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
SCCPDH-201ENST00000366510 KIF21AQ7Z4S6 1674 aa37.81■■■■□ 3.64
SCCPDH-201ENST00000366510 ATP1B4Q9UN42 357 aaPredicted RBP37.79■■■■□ 3.64
SCCPDH-201ENST00000366510 RRBP1Q9P2E9 1410 aaKnown RBP37.76■■■■□ 3.64
SCCPDH-201ENST00000366510 FHOD3Q2V2M9 1422 aa37.75■■■■□ 3.63
SCCPDH-201ENST00000366510 ITGAEP38570 1179 aa37.75■■■■□ 3.63
SCCPDH-201ENST00000366510 WDR97A6NE52 1622 aa37.75■■■■□ 3.63
SCCPDH-201ENST00000366510 CUL7Q14999 1698 aa37.72■■■■□ 3.63
SCCPDH-201ENST00000366510 TIAM1Q13009 1591 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms