RNA–Protein interactions for RNA: ENST00000587722.1

BLOC1S3-202, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 BASIC

Gene BLOC1S3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-202ENST00000587722 NISCHQ9Y2I1 1504 aa61.82■■■■■ 7.49
BLOC1S3-202ENST00000587722 CCDC180Q9P1Z9 1646 aa55.25■■■■■ 6.44
BLOC1S3-202ENST00000587722 ABCC9O60706 1549 aa54.68■■■■■ 6.34
BLOC1S3-202ENST00000587722 RB1CC1Q8TDY2 1594 aa52.32■■■■■ 5.97
BLOC1S3-202ENST00000587722 NACADO15069 1562 aa52.1■■■■■ 5.93
BLOC1S3-202ENST00000587722 DCAF8L2P0C7V8 631 aa51.88■■■■■ 5.9
BLOC1S3-202ENST00000587722 MYO15BQ96JP2 1530 aa51.58■■■■■ 5.85
BLOC1S3-202ENST00000587722 ZCCHC6Q5VYS8 1495 aaKnown RBP51.37■■■■■ 5.81
BLOC1S3-202ENST00000587722 DCAF1Q9Y4B6 1507 aa51.13■■■■■ 5.77
BLOC1S3-202ENST00000587722 UNC13AQ9UPW8 1703 aa51.12■■■■■ 5.77
BLOC1S3-202ENST00000587722 PABPN1Q86U42 306 aaKnown RBP eCLIP50.97■■■■■ 5.75
BLOC1S3-202ENST00000587722 BICRAQ9NZM4 1560 aa50.77■■■■■ 5.72
BLOC1S3-202ENST00000587722 DNAJC5BQ9UF47 199 aa50.75■■■■■ 5.71
BLOC1S3-202ENST00000587722 SCRIBQ14160 1630 aa50.36■■■■■ 5.65
BLOC1S3-202ENST00000587722 SHROOM4Q9ULL8 1493 aa50.19■■■■■ 5.62
BLOC1S3-202ENST00000587722 EIF4G1Q04637 1599 aaKnown RBP49.48■■■■■ 5.51
BLOC1S3-202ENST00000587722 CC2D2AQ9P2K1 1620 aa49.43■■■■■ 5.5
BLOC1S3-202ENST00000587722 CECR2Q9BXF3 1484 aa49.21■■■■■ 5.47
BLOC1S3-202ENST00000587722 SMARCA4P51532 1647 aa48.11■■■■■ 5.29
BLOC1S3-202ENST00000587722 NCAPD3P42695 1498 aa48.08■■■■■ 5.29
BLOC1S3-202ENST00000587722 ATAD2BQ9ULI0 1458 aa48.01■■■■■ 5.28
BLOC1S3-202ENST00000587722 BAZ1AQ9NRL2 1556 aaPredicted RBP47.96■■■■■ 5.27
BLOC1S3-202ENST00000587722 SMARCA2P51531 1590 aa47.92■■■■■ 5.26
BLOC1S3-202ENST00000587722 HMGXB3Q12766 1538 aa47.8■■■■■ 5.24
BLOC1S3-202ENST00000587722 PEG3Q9GZU2 1588 aa47.66■■■■■ 5.22
BLOC1S3-202ENST00000587722 MROH2BQ7Z745 1585 aa47.64■■■■■ 5.22
BLOC1S3-202ENST00000587722 BAZ1BQ9UIG0 1483 aaKnown RBP47.59■■■■■ 5.21
BLOC1S3-202ENST00000587722 ERCC6Q03468 1493 aa47.19■■■■■ 5.14
BLOC1S3-202ENST00000587722 NESP48681 1621 aa47.13■■■■■ 5.14
BLOC1S3-202ENST00000587722 WIZO95785 1651 aa47.08■■■■■ 5.13
BLOC1S3-202ENST00000587722 CUX2O14529 1486 aa46.92■■■■■ 5.1
BLOC1S3-202ENST00000587722 LAMC3Q9Y6N6 1575 aa46.92■■■■■ 5.1
BLOC1S3-202ENST00000587722 RSF1Q96T23 1441 aaPredicted RBP46.86■■■■■ 5.09
BLOC1S3-202ENST00000587722 CADPSQ9ULU8 1353 aa46.64■■■■■ 5.06
BLOC1S3-202ENST00000587722 PDS5BQ9NTI5 1447 aa46.62■■■■■ 5.05
BLOC1S3-202ENST00000587722 THOC2Q8NI27 1593 aaKnown RBP46.56■■■■■ 5.04
BLOC1S3-202ENST00000587722 TOP2AP11388 1531 aaKnown RBP46.56■■■■■ 5.04
BLOC1S3-202ENST00000587722 KIF21AQ7Z4S6 1674 aa46.55■■■■■ 5.04
BLOC1S3-202ENST00000587722 CFTRP13569 1480 aa46.24■■■■■ 4.99
BLOC1S3-202ENST00000587722 DNAJC5Q9H3Z4 198 aa46.21■■■■■ 4.99
BLOC1S3-202ENST00000587722 MRC2Q9UBG0 1479 aa46.19■■■■■ 4.99
BLOC1S3-202ENST00000587722 CEP164Q9UPV0 1460 aa46.12■■■■■ 4.97
BLOC1S3-202ENST00000587722 FANCD2Q9BXW9 1451 aa46.12■■■■■ 4.97
BLOC1S3-202ENST00000587722 WDR62O43379 1518 aa46.07■■■■■ 4.97
BLOC1S3-202ENST00000587722 CCDC88BA6NC98 1476 aa46■■■■■ 4.95
BLOC1S3-202ENST00000587722 PRDM2Q13029 1718 aa45.83■■■■■ 4.93
BLOC1S3-202ENST00000587722 URB2Q14146 1524 aaKnown RBP45.7■■■■■ 4.91
BLOC1S3-202ENST00000587722 TOPBP1Q92547 1522 aa45.31■■■■■ 4.84
BLOC1S3-202ENST00000587722 ABCC8Q09428 1581 aa45.25■■■■■ 4.83
BLOC1S3-202ENST00000587722 DNMBPQ6XZF7 1577 aa45.2■■■■■ 4.83
BLOC1S3-202ENST00000587722 IFT140Q96RY7 1462 aa45.18■■■■■ 4.82
BLOC1S3-202ENST00000587722 SUPT5HO00267 1087 aaKnown RBP45.16■■■■■ 4.82
BLOC1S3-202ENST00000587722 ZNF608Q9ULD9 1512 aaPredicted RBP45.04■■■■■ 4.8
BLOC1S3-202ENST00000587722 POLA1P09884 1462 aaPredicted RBP44.89■■■■■ 4.78
BLOC1S3-202ENST00000587722 TARBP1Q13395 1621 aaKnown RBP44.87■■■■■ 4.77
BLOC1S3-202ENST00000587722 EIF4G3O43432 1585 aaKnown RBP44.84■■■■■ 4.77
BLOC1S3-202ENST00000587722 OSCARQ8IYS5 282 aa44.83■■■■■ 4.77
BLOC1S3-202ENST00000587722 CUX1P39880 1505 aa44.74■■■■■ 4.75
BLOC1S3-202ENST00000587722 AQRO60306 1485 aaKnown RBP eCLIP44.69■■■■■ 4.74
BLOC1S3-202ENST00000587722 RAD54L2Q9Y4B4 1467 aa44.69■■■■■ 4.74
BLOC1S3-202ENST00000587722 FGD5Q6ZNL6 1462 aa44.68■■■■■ 4.74
BLOC1S3-202ENST00000587722 SOGA1O94964 1423 aa44.67■■■■■ 4.74
BLOC1S3-202ENST00000587722 TDRD9Q8NDG6 1382 aaKnown RBP44.51■■■■■ 4.72
BLOC1S3-202ENST00000587722 WDR97A6NE52 1622 aa44.47■■■■■ 4.71
BLOC1S3-202ENST00000587722 TRIM41Q8WV44 630 aa44.42■■■■■ 4.7
BLOC1S3-202ENST00000587722 CHD1O14646 1710 aa44.38■■■■■ 4.7
BLOC1S3-202ENST00000587722 FBLN2P98095 1184 aa44.28■■■■■ 4.68
BLOC1S3-202ENST00000587722 SNAPC4Q5SXM2 1469 aa44.27■■■■■ 4.68
BLOC1S3-202ENST00000587722 GRIN2BQ13224 1484 aa44.24■■■■■ 4.67
BLOC1S3-202ENST00000587722 RIMBP3CA6NJZ7 1639 aa44.21■■■■■ 4.67
BLOC1S3-202ENST00000587722 RIMBP3BA6NNM3 1639 aa44.21■■■■■ 4.67
BLOC1S3-202ENST00000587722 RIMBP3Q9UFD9 1639 aa44.21■■■■■ 4.67
BLOC1S3-202ENST00000587722 ABCA10Q8WWZ4 1543 aa44.21■■■■■ 4.67
BLOC1S3-202ENST00000587722 WRNQ14191 1432 aaPredicted RBP eCLIP44.2■■■■■ 4.67
BLOC1S3-202ENST00000587722 MAGI1Q96QZ7 1491 aaPredicted RBP44.2■■■■■ 4.67
BLOC1S3-202ENST00000587722 TOP2BQ02880 1626 aa44.18■■■■■ 4.66
BLOC1S3-202ENST00000587722 BIVM-ERCC5R4GMW8 1640 aa44.17■■■■■ 4.66
BLOC1S3-202ENST00000587722 GAPVD1Q14C86 1478 aa44.15■■■■■ 4.66
BLOC1S3-202ENST00000587722 ARHGEF11O15085 1522 aa44.14■■■■■ 4.66
BLOC1S3-202ENST00000587722 SYNJ1O43426 1573 aa44.14■■■■■ 4.66
BLOC1S3-202ENST00000587722 PBRM1Q86U86 1689 aa44.1■■■■■ 4.65
BLOC1S3-202ENST00000587722 ABCA5Q8WWZ7 1642 aa44.1■■■■■ 4.65
BLOC1S3-202ENST00000587722 CHMP7Q8WUX9 453 aaPredicted RBP44.05■■■■■ 4.64
BLOC1S3-202ENST00000587722 SYNJ2O15056 1496 aa44.03■■■■■ 4.64
BLOC1S3-202ENST00000587722 CLASP1Q7Z460 1538 aa43.9■■■■■ 4.62
BLOC1S3-202ENST00000587722 ARAP1Q96P48 1450 aa43.75■■■■■ 4.59
BLOC1S3-202ENST00000587722 CYB5RLQ6IPT4 315 aa43.74■■■■■ 4.59
BLOC1S3-202ENST00000587722 ADAMTS12P58397 1594 aa43.74■■■■■ 4.59
BLOC1S3-202ENST00000587722 GRIN2AQ12879 1464 aa43.68■■■■■ 4.58
BLOC1S3-202ENST00000587722 ERICH3Q5RHP9 1530 aa43.68■■■■■ 4.58
BLOC1S3-202ENST00000587722 FHAD1B1AJZ9 1412 aa43.62■■■■■ 4.57
BLOC1S3-202ENST00000587722 NUP160Q12769 1436 aa43.51■■■■■ 4.56
BLOC1S3-202ENST00000587722 CEP170Q5SW79 1584 aa43.49■■■■■ 4.55
BLOC1S3-202ENST00000587722 KIF27Q86VH2 1401 aa43.32■■■■■ 4.53
BLOC1S3-202ENST00000587722 SHROOM2Q13796 1616 aa43.26■■■■■ 4.52
BLOC1S3-202ENST00000587722 ERCC6L2Q5T890 1561 aa43.24■■■■■ 4.51
BLOC1S3-202ENST00000587722 IGF1RP08069 1367 aa43.22■■■■■ 4.51
BLOC1S3-202ENST00000587722 CUL7Q14999 1698 aa43.16■■■■■ 4.5
BLOC1S3-202ENST00000587722 RUSC2Q8N2Y8 1516 aa43.12■■■■■ 4.49
BLOC1S3-202ENST00000587722 TRHP20396 242 aaPredicted RBP43.07■■■■■ 4.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms