Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PRAMEF11O60813 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PRAMEF11O60813 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.5■■□□□ 1.67
PRAMEF11O60813 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRAMEF11O60813 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.5■■□□□ 1.67
PRAMEF11O60813 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRAMEF11O60813 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PRAMEF11O60813 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRAMEF11O60813 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.49■■□□□ 1.67
PRAMEF11O60813 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.49■■□□□ 1.67
PRAMEF11O60813 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRAMEF11O60813 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRAMEF11O60813 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
PRAMEF11O60813 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PRAMEF11O60813 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.47■■□□□ 1.67
PRAMEF11O60813 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PRAMEF11O60813 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.47■■□□□ 1.67
PRAMEF11O60813 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.47■■□□□ 1.67
PRAMEF11O60813 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PRAMEF11O60813 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PRAMEF11O60813 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PRAMEF11O60813 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PRAMEF11O60813 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.46■■□□□ 1.67
PRAMEF11O60813 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PRAMEF11O60813 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PRAMEF11O60813 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.44■■□□□ 1.66
PRAMEF11O60813 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PRAMEF11O60813 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
PRAMEF11O60813 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
PRAMEF11O60813 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.44■■□□□ 1.66
PRAMEF11O60813 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.43■■□□□ 1.66
PRAMEF11O60813 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PRAMEF11O60813 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.43■■□□□ 1.66
PRAMEF11O60813 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PRAMEF11O60813 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.43■■□□□ 1.66
PRAMEF11O60813 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.43■■□□□ 1.66
PRAMEF11O60813 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PRAMEF11O60813 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PRAMEF11O60813 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PRAMEF11O60813 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
PRAMEF11O60813 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.42■■□□□ 1.66
PRAMEF11O60813 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PRAMEF11O60813 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.42■■□□□ 1.66
PRAMEF11O60813 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PRAMEF11O60813 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
PRAMEF11O60813 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PRAMEF11O60813 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.41■■□□□ 1.66
PRAMEF11O60813 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PRAMEF11O60813 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PRAMEF11O60813 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.41■■□□□ 1.66
PRAMEF11O60813 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
PRAMEF11O60813 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PRAMEF11O60813 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.4■■□□□ 1.66
PRAMEF11O60813 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.4■■□□□ 1.66
PRAMEF11O60813 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
PRAMEF11O60813 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PRAMEF11O60813 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PRAMEF11O60813 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PRAMEF11O60813 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PRAMEF11O60813 WHAMMP3-201ENST00000611636 1609 ntBASIC25.38■■□□□ 1.65
PRAMEF11O60813 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRAMEF11O60813 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRAMEF11O60813 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.38■■□□□ 1.65
PRAMEF11O60813 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PRAMEF11O60813 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PRAMEF11O60813 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.37■■□□□ 1.65
PRAMEF11O60813 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PRAMEF11O60813 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
PRAMEF11O60813 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
PRAMEF11O60813 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PRAMEF11O60813 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PRAMEF11O60813 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PRAMEF11O60813 AL359258.2-201ENST00000564063 1566 ntBASIC25.35■■□□□ 1.65
PRAMEF11O60813 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRAMEF11O60813 AC126177.7-201ENST00000547904 679 ntBASIC25.34■■□□□ 1.65
PRAMEF11O60813 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PRAMEF11O60813 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PRAMEF11O60813 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PRAMEF11O60813 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
PRAMEF11O60813 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PRAMEF11O60813 AC060814.1-201ENST00000554326 538 ntBASIC25.32■■□□□ 1.64
PRAMEF11O60813 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
PRAMEF11O60813 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.31■■□□□ 1.64
PRAMEF11O60813 AL449106.1-201ENST00000608517 1980 ntBASIC25.31■■□□□ 1.64
PRAMEF11O60813 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PRAMEF11O60813 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PRAMEF11O60813 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PRAMEF11O60813 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PRAMEF11O60813 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.3■■□□□ 1.64
PRAMEF11O60813 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
PRAMEF11O60813 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRAMEF11O60813 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.29■■□□□ 1.64
PRAMEF11O60813 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRAMEF11O60813 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRAMEF11O60813 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.29■■□□□ 1.64
PRAMEF11O60813 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRAMEF11O60813 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PRAMEF11O60813 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRAMEF11O60813 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRAMEF11O60813 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms