RNA–Protein interactions for RNA: ENST00000629930.1

SRP68-213, Transcript of signal recognition particle 68, humanhuman

TSL 5 BASIC

Gene SRP68, Length 165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-213ENST00000629930 NISCHQ9Y2I1 1504 aa62.5■■■■■ 7.6
SRP68-213ENST00000629930 CCDC180Q9P1Z9 1646 aa55.89■■■■■ 6.54
SRP68-213ENST00000629930 ABCC9O60706 1549 aa55.28■■■■■ 6.44
SRP68-213ENST00000629930 RB1CC1Q8TDY2 1594 aa52.9■■■■■ 6.06
SRP68-213ENST00000629930 NACADO15069 1562 aa52.7■■■■■ 6.03
SRP68-213ENST00000629930 DCAF8L2P0C7V8 631 aa52.31■■■■■ 5.96
SRP68-213ENST00000629930 MYO15BQ96JP2 1530 aa52.22■■■■■ 5.95
SRP68-213ENST00000629930 ZCCHC6Q5VYS8 1495 aaKnown RBP51.93■■■■■ 5.9
SRP68-213ENST00000629930 UNC13AQ9UPW8 1703 aa51.73■■■■■ 5.87
SRP68-213ENST00000629930 DCAF1Q9Y4B6 1507 aa51.73■■■■■ 5.87
SRP68-213ENST00000629930 PABPN1Q86U42 306 aaKnown RBP eCLIP51.51■■■■■ 5.84
SRP68-213ENST00000629930 DNAJC5BQ9UF47 199 aa51.44■■■■■ 5.83
SRP68-213ENST00000629930 BICRAQ9NZM4 1560 aa51.4■■■■■ 5.82
SRP68-213ENST00000629930 SCRIBQ14160 1630 aa50.87■■■■■ 5.73
SRP68-213ENST00000629930 SHROOM4Q9ULL8 1493 aa50.8■■■■■ 5.72
SRP68-213ENST00000629930 EIF4G1Q04637 1599 aaKnown RBP50.05■■■■■ 5.6
SRP68-213ENST00000629930 CC2D2AQ9P2K1 1620 aa50.02■■■■■ 5.6
SRP68-213ENST00000629930 CECR2Q9BXF3 1484 aa49.78■■■■■ 5.56
SRP68-213ENST00000629930 NCAPD3P42695 1498 aa48.66■■■■■ 5.38
SRP68-213ENST00000629930 SMARCA4P51532 1647 aa48.64■■■■■ 5.38
SRP68-213ENST00000629930 ATAD2BQ9ULI0 1458 aa48.56■■■■■ 5.36
SRP68-213ENST00000629930 BAZ1AQ9NRL2 1556 aaPredicted RBP48.47■■■■■ 5.35
SRP68-213ENST00000629930 SMARCA2P51531 1590 aa48.45■■■■■ 5.35
SRP68-213ENST00000629930 HMGXB3Q12766 1538 aa48.35■■■■■ 5.33
SRP68-213ENST00000629930 PEG3Q9GZU2 1588 aa48.23■■■■■ 5.31
SRP68-213ENST00000629930 MROH2BQ7Z745 1585 aa48.15■■■■■ 5.3
SRP68-213ENST00000629930 BAZ1BQ9UIG0 1483 aaKnown RBP48.08■■■■■ 5.29
SRP68-213ENST00000629930 ERCC6Q03468 1493 aa47.67■■■■■ 5.22
SRP68-213ENST00000629930 NESP48681 1621 aa47.67■■■■■ 5.22
SRP68-213ENST00000629930 WIZO95785 1651 aa47.57■■■■■ 5.21
SRP68-213ENST00000629930 CUX2O14529 1486 aa47.51■■■■■ 5.2
SRP68-213ENST00000629930 LAMC3Q9Y6N6 1575 aa47.45■■■■■ 5.19
SRP68-213ENST00000629930 RSF1Q96T23 1441 aaPredicted RBP47.35■■■■■ 5.17
SRP68-213ENST00000629930 CADPSQ9ULU8 1353 aa47.16■■■■■ 5.14
SRP68-213ENST00000629930 THOC2Q8NI27 1593 aaKnown RBP47.14■■■■■ 5.14
SRP68-213ENST00000629930 PDS5BQ9NTI5 1447 aa47.13■■■■■ 5.13
SRP68-213ENST00000629930 KIF21AQ7Z4S6 1674 aa47.08■■■■■ 5.13
SRP68-213ENST00000629930 TOP2AP11388 1531 aaKnown RBP47.05■■■■■ 5.12
SRP68-213ENST00000629930 DNAJC5Q9H3Z4 198 aa46.86■■■■■ 5.09
SRP68-213ENST00000629930 CFTRP13569 1480 aa46.77■■■■■ 5.08
SRP68-213ENST00000629930 MRC2Q9UBG0 1479 aa46.71■■■■■ 5.07
SRP68-213ENST00000629930 FANCD2Q9BXW9 1451 aa46.62■■■■■ 5.05
SRP68-213ENST00000629930 WDR62O43379 1518 aa46.61■■■■■ 5.05
SRP68-213ENST00000629930 CEP164Q9UPV0 1460 aa46.61■■■■■ 5.05
SRP68-213ENST00000629930 CCDC88BA6NC98 1476 aa46.49■■■■■ 5.03
SRP68-213ENST00000629930 PRDM2Q13029 1718 aa46.34■■■■■ 5.01
SRP68-213ENST00000629930 URB2Q14146 1524 aaKnown RBP46.23■■■■■ 4.99
SRP68-213ENST00000629930 TOPBP1Q92547 1522 aa45.81■■■■■ 4.92
SRP68-213ENST00000629930 ABCC8Q09428 1581 aa45.75■■■■■ 4.91
SRP68-213ENST00000629930 DNMBPQ6XZF7 1577 aa45.69■■■■■ 4.9
SRP68-213ENST00000629930 IFT140Q96RY7 1462 aa45.68■■■■■ 4.9
SRP68-213ENST00000629930 ZNF608Q9ULD9 1512 aaPredicted RBP45.55■■■■■ 4.88
SRP68-213ENST00000629930 SUPT5HO00267 1087 aaKnown RBP45.48■■■■■ 4.87
SRP68-213ENST00000629930 TARBP1Q13395 1621 aaKnown RBP45.39■■■■■ 4.86
SRP68-213ENST00000629930 POLA1P09884 1462 aaPredicted RBP45.38■■■■■ 4.86
SRP68-213ENST00000629930 OSCARQ8IYS5 282 aa45.35■■■■■ 4.85
SRP68-213ENST00000629930 EIF4G3O43432 1585 aaKnown RBP45.33■■■■■ 4.85
SRP68-213ENST00000629930 CUX1P39880 1505 aa45.21■■■■■ 4.83
SRP68-213ENST00000629930 AQRO60306 1485 aaKnown RBP eCLIP45.17■■■■■ 4.823e-8■■□□□ 14.1
SRP68-213ENST00000629930 RAD54L2Q9Y4B4 1467 aa45.17■■■■■ 4.82
SRP68-213ENST00000629930 FGD5Q6ZNL6 1462 aa45.15■■■■■ 4.82
SRP68-213ENST00000629930 SOGA1O94964 1423 aa45.14■■■■■ 4.82
SRP68-213ENST00000629930 WDR97A6NE52 1622 aa44.99■■■■■ 4.79
SRP68-213ENST00000629930 TDRD9Q8NDG6 1382 aaKnown RBP44.97■■■■■ 4.79
SRP68-213ENST00000629930 TRIM41Q8WV44 630 aa44.89■■■■■ 4.78
SRP68-213ENST00000629930 CHD1O14646 1710 aa44.88■■■■■ 4.78
SRP68-213ENST00000629930 RIMBP3CA6NJZ7 1639 aa44.75■■■■■ 4.75
SRP68-213ENST00000629930 RIMBP3BA6NNM3 1639 aa44.75■■■■■ 4.75
SRP68-213ENST00000629930 RIMBP3Q9UFD9 1639 aa44.75■■■■■ 4.75
SRP68-213ENST00000629930 SNAPC4Q5SXM2 1469 aa44.74■■■■■ 4.75
SRP68-213ENST00000629930 GRIN2BQ13224 1484 aa44.72■■■■■ 4.75
SRP68-213ENST00000629930 ABCA10Q8WWZ4 1543 aa44.7■■■■■ 4.75
SRP68-213ENST00000629930 MAGI1Q96QZ7 1491 aaPredicted RBP44.68■■■■■ 4.74
SRP68-213ENST00000629930 ARHGEF11O15085 1522 aa44.67■■■■■ 4.74
SRP68-213ENST00000629930 FBLN2P98095 1184 aa44.67■■■■■ 4.74
SRP68-213ENST00000629930 BIVM-ERCC5R4GMW8 1640 aa44.64■■■■■ 4.74
SRP68-213ENST00000629930 TOP2BQ02880 1626 aa44.64■■■■■ 4.74
SRP68-213ENST00000629930 WRNQ14191 1432 aaPredicted RBP eCLIP44.63■■■■■ 4.73
SRP68-213ENST00000629930 GAPVD1Q14C86 1478 aa44.61■■■■■ 4.73
SRP68-213ENST00000629930 ABCA5Q8WWZ7 1642 aa44.6■■■■■ 4.73
SRP68-213ENST00000629930 SYNJ1O43426 1573 aa44.58■■■■■ 4.73
SRP68-213ENST00000629930 PBRM1Q86U86 1689 aa44.57■■■■■ 4.73
SRP68-213ENST00000629930 SYNJ2O15056 1496 aa44.52■■■■■ 4.72
SRP68-213ENST00000629930 CHMP7Q8WUX9 453 aaPredicted RBP44.48■■■■■ 4.71
SRP68-213ENST00000629930 CLASP1Q7Z460 1538 aa44.44■■■■■ 4.7
SRP68-213ENST00000629930 ARAP1Q96P48 1450 aa44.27■■■■■ 4.68
SRP68-213ENST00000629930 CYB5RLQ6IPT4 315 aa44.21■■■■■ 4.67
SRP68-213ENST00000629930 ADAMTS12P58397 1594 aa44.21■■■■■ 4.67
SRP68-213ENST00000629930 ERICH3Q5RHP9 1530 aa44.15■■■■■ 4.66
SRP68-213ENST00000629930 GRIN2AQ12879 1464 aa44.15■■■■■ 4.66
SRP68-213ENST00000629930 FHAD1B1AJZ9 1412 aa44.08■■■■■ 4.65
SRP68-213ENST00000629930 NUP160Q12769 1436 aa44.01■■■■■ 4.64
SRP68-213ENST00000629930 CEP170Q5SW79 1584 aa43.97■■■■■ 4.63
SRP68-213ENST00000629930 SHROOM2Q13796 1616 aa43.78■■■■■ 4.6
SRP68-213ENST00000629930 ERCC6L2Q5T890 1561 aa43.74■■■■■ 4.59
SRP68-213ENST00000629930 KIF27Q86VH2 1401 aa43.73■■■■■ 4.59
SRP68-213ENST00000629930 IGF1RP08069 1367 aa43.69■■■■■ 4.59
SRP68-213ENST00000629930 CUL7Q14999 1698 aa43.59■■■■■ 4.57
SRP68-213ENST00000629930 RUSC2Q8N2Y8 1516 aa43.58■■■■■ 4.57
SRP68-213ENST00000629930 TRHP20396 242 aaPredicted RBP43.5■■■■■ 4.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms