RNA–Protein interactions for RNA: ENST00000379055.5

TPT1-202, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2 BASIC

Gene TPT1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-202ENST00000379055 NISCHQ9Y2I1 1504 aa61.6■■■■■ 7.45
TPT1-202ENST00000379055 CCDC180Q9P1Z9 1646 aa55.03■■■■■ 6.4
TPT1-202ENST00000379055 ABCC9O60706 1549 aa54.48■■■■■ 6.31
TPT1-202ENST00000379055 RB1CC1Q8TDY2 1594 aa52.13■■■■■ 5.94
TPT1-202ENST00000379055 DCAF8L2P0C7V8 631 aa51.96■■■■■ 5.91
TPT1-202ENST00000379055 NACADO15069 1562 aa51.89■■■■■ 5.9
TPT1-202ENST00000379055 MYO15BQ96JP2 1530 aa51.31■■■■■ 5.8
TPT1-202ENST00000379055 ZCCHC6Q5VYS8 1495 aaKnown RBP51.16■■■■■ 5.78
TPT1-202ENST00000379055 DCAF1Q9Y4B6 1507 aa50.88■■■■■ 5.74
TPT1-202ENST00000379055 UNC13AQ9UPW8 1703 aa50.87■■■■■ 5.73
TPT1-202ENST00000379055 PABPN1Q86U42 306 aaKnown RBP eCLIP50.84■■■■■ 5.73
TPT1-202ENST00000379055 BICRAQ9NZM4 1560 aa50.47■■■■■ 5.67
TPT1-202ENST00000379055 DNAJC5BQ9UF47 199 aa50.44■■■■■ 5.67
TPT1-202ENST00000379055 SCRIBQ14160 1630 aa50.23■■■■■ 5.63
TPT1-202ENST00000379055 SHROOM4Q9ULL8 1493 aa49.91■■■■■ 5.58
TPT1-202ENST00000379055 EIF4G1Q04637 1599 aaKnown RBP49.24■■■■■ 5.47
TPT1-202ENST00000379055 CC2D2AQ9P2K1 1620 aa49.21■■■■■ 5.47
TPT1-202ENST00000379055 CECR2Q9BXF3 1484 aa49■■■■■ 5.44
TPT1-202ENST00000379055 SMARCA4P51532 1647 aa47.94■■■■■ 5.26
TPT1-202ENST00000379055 NCAPD3P42695 1498 aa47.85■■■■■ 5.25
TPT1-202ENST00000379055 BAZ1AQ9NRL2 1556 aaPredicted RBP47.82■■■■■ 5.25
TPT1-202ENST00000379055 ATAD2BQ9ULI0 1458 aa47.81■■■■■ 5.24
TPT1-202ENST00000379055 SMARCA2P51531 1590 aa47.77■■■■■ 5.24
TPT1-202ENST00000379055 HMGXB3Q12766 1538 aa47.57■■■■■ 5.21
TPT1-202ENST00000379055 MROH2BQ7Z745 1585 aa47.46■■■■■ 5.19
TPT1-202ENST00000379055 BAZ1BQ9UIG0 1483 aaKnown RBP47.46■■■■■ 5.19
TPT1-202ENST00000379055 PEG3Q9GZU2 1588 aa47.41■■■■■ 5.18
TPT1-202ENST00000379055 ERCC6Q03468 1493 aa47.08■■■■■ 5.13
TPT1-202ENST00000379055 WIZO95785 1651 aa46.96■■■■■ 5.11
TPT1-202ENST00000379055 NESP48681 1621 aa46.93■■■■■ 5.1
TPT1-202ENST00000379055 LAMC3Q9Y6N6 1575 aa46.73■■■■■ 5.07
TPT1-202ENST00000379055 RSF1Q96T23 1441 aaPredicted RBP46.71■■■■■ 5.07
TPT1-202ENST00000379055 CUX2O14529 1486 aa46.68■■■■■ 5.06
TPT1-202ENST00000379055 PDS5BQ9NTI5 1447 aa46.49■■■■■ 5.03
TPT1-202ENST00000379055 CADPSQ9ULU8 1353 aa46.48■■■■■ 5.03
TPT1-202ENST00000379055 TOP2AP11388 1531 aaKnown RBP46.41■■■■■ 5.02
TPT1-202ENST00000379055 KIF21AQ7Z4S6 1674 aa46.37■■■■■ 5.01
TPT1-202ENST00000379055 THOC2Q8NI27 1593 aaKnown RBP46.3■■■■■ 5
TPT1-202ENST00000379055 CFTRP13569 1480 aa46.04■■■■■ 4.96
TPT1-202ENST00000379055 MRC2Q9UBG0 1479 aa46.01■■■■■ 4.96
TPT1-202ENST00000379055 CEP164Q9UPV0 1460 aa45.99■■■■■ 4.95
TPT1-202ENST00000379055 FANCD2Q9BXW9 1451 aa45.96■■■■■ 4.95
TPT1-202ENST00000379055 DNAJC5Q9H3Z4 198 aa45.94■■■■■ 4.94
TPT1-202ENST00000379055 CCDC88BA6NC98 1476 aa45.87■■■■■ 4.93
TPT1-202ENST00000379055 WDR62O43379 1518 aa45.83■■■■■ 4.93
TPT1-202ENST00000379055 PRDM2Q13029 1718 aa45.68■■■■■ 4.9
TPT1-202ENST00000379055 URB2Q14146 1524 aaKnown RBP45.49■■■■■ 4.87
TPT1-202ENST00000379055 SUPT5HO00267 1087 aaKnown RBP45.29■■■■■ 4.84
TPT1-202ENST00000379055 TOPBP1Q92547 1522 aa45.14■■■■■ 4.82
TPT1-202ENST00000379055 ABCC8Q09428 1581 aa45.14■■■■■ 4.82
TPT1-202ENST00000379055 DNMBPQ6XZF7 1577 aa45.05■■■■■ 4.8
TPT1-202ENST00000379055 IFT140Q96RY7 1462 aa45.02■■■■■ 4.8
TPT1-202ENST00000379055 ZNF608Q9ULD9 1512 aaPredicted RBP44.84■■■■■ 4.77
TPT1-202ENST00000379055 OSCARQ8IYS5 282 aa44.73■■■■■ 4.75
TPT1-202ENST00000379055 POLA1P09884 1462 aaPredicted RBP44.72■■■■■ 4.75
TPT1-202ENST00000379055 EIF4G3O43432 1585 aaKnown RBP44.65■■■■■ 4.74
TPT1-202ENST00000379055 TARBP1Q13395 1621 aaKnown RBP44.65■■■■■ 4.74
TPT1-202ENST00000379055 SOGA1O94964 1423 aa44.58■■■■■ 4.73
TPT1-202ENST00000379055 CUX1P39880 1505 aa44.56■■■■■ 4.72
TPT1-202ENST00000379055 AQRO60306 1485 aaKnown RBP eCLIP44.55■■■■■ 4.725e-9■■■■■ 28.2
TPT1-202ENST00000379055 FGD5Q6ZNL6 1462 aa44.55■■■■■ 4.72
TPT1-202ENST00000379055 RAD54L2Q9Y4B4 1467 aa44.55■■■■■ 4.72
TPT1-202ENST00000379055 TDRD9Q8NDG6 1382 aaKnown RBP44.4■■■■■ 4.7
TPT1-202ENST00000379055 TRIM41Q8WV44 630 aa44.33■■■■■ 4.69
TPT1-202ENST00000379055 FBLN2P98095 1184 aa44.29■■■■■ 4.68
TPT1-202ENST00000379055 WDR97A6NE52 1622 aa44.28■■■■■ 4.68
TPT1-202ENST00000379055 CHD1O14646 1710 aa44.23■■■■■ 4.67
TPT1-202ENST00000379055 SNAPC4Q5SXM2 1469 aa44.13■■■■■ 4.65
TPT1-202ENST00000379055 WRNQ14191 1432 aaPredicted RBP eCLIP44.12■■■■■ 4.65
TPT1-202ENST00000379055 GRIN2BQ13224 1484 aa44.11■■■■■ 4.65
TPT1-202ENST00000379055 ABCA10Q8WWZ4 1543 aa44.05■■■■■ 4.64
TPT1-202ENST00000379055 GAPVD1Q14C86 1478 aa44.04■■■■■ 4.64
TPT1-202ENST00000379055 TOP2BQ02880 1626 aa44.04■■■■■ 4.64
TPT1-202ENST00000379055 MAGI1Q96QZ7 1491 aaPredicted RBP44.03■■■■■ 4.64
TPT1-202ENST00000379055 CHMP7Q8WUX9 453 aaPredicted RBP44.03■■■■■ 4.64
TPT1-202ENST00000379055 BIVM-ERCC5R4GMW8 1640 aa44.02■■■■■ 4.64
TPT1-202ENST00000379055 RIMBP3CA6NJZ7 1639 aa44■■■■■ 4.63
TPT1-202ENST00000379055 RIMBP3BA6NNM3 1639 aa44■■■■■ 4.63
TPT1-202ENST00000379055 RIMBP3Q9UFD9 1639 aa44■■■■■ 4.63
TPT1-202ENST00000379055 SYNJ1O43426 1573 aa43.99■■■■■ 4.63
TPT1-202ENST00000379055 PBRM1Q86U86 1689 aa43.97■■■■■ 4.63
TPT1-202ENST00000379055 ARHGEF11O15085 1522 aa43.93■■■■■ 4.62
TPT1-202ENST00000379055 ABCA5Q8WWZ7 1642 aa43.91■■■■■ 4.62
TPT1-202ENST00000379055 SYNJ2O15056 1496 aa43.88■■■■■ 4.61
TPT1-202ENST00000379055 CLASP1Q7Z460 1538 aa43.67■■■■■ 4.58
TPT1-202ENST00000379055 CYB5RLQ6IPT4 315 aa43.66■■■■■ 4.58
TPT1-202ENST00000379055 ADAMTS12P58397 1594 aa43.56■■■■■ 4.56
TPT1-202ENST00000379055 ERICH3Q5RHP9 1530 aa43.53■■■■■ 4.56
TPT1-202ENST00000379055 GRIN2AQ12879 1464 aa43.52■■■■■ 4.56
TPT1-202ENST00000379055 ARAP1Q96P48 1450 aa43.51■■■■■ 4.56
TPT1-202ENST00000379055 FHAD1B1AJZ9 1412 aa43.5■■■■■ 4.55
TPT1-202ENST00000379055 CEP170Q5SW79 1584 aa43.31■■■■■ 4.52
TPT1-202ENST00000379055 NUP160Q12769 1436 aa43.31■■■■■ 4.52
TPT1-202ENST00000379055 KIF27Q86VH2 1401 aa43.27■■■■■ 4.52
TPT1-202ENST00000379055 IGF1RP08069 1367 aa43.1■■■■■ 4.49
TPT1-202ENST00000379055 TRHP20396 242 aaPredicted RBP43.06■■■■■ 4.48
TPT1-202ENST00000379055 CUL7Q14999 1698 aa43.05■■■■■ 4.48
TPT1-202ENST00000379055 SHROOM2Q13796 1616 aa43.04■■■■■ 4.48
TPT1-202ENST00000379055 ERCC6L2Q5T890 1561 aa43.03■■■■■ 4.48
TPT1-202ENST00000379055 JPH4Q96JJ6 628 aa42.96■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms