RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 NISCHQ9Y2I1 1504 aa54.03■■■■■ 6.24
CDH24-206ENST00000610348 CCDC180Q9P1Z9 1646 aa46.55■■■■■ 5.04
CDH24-206ENST00000610348 ZCCHC6Q5VYS8 1495 aaKnown RBP45.66■■■■■ 4.9
CDH24-206ENST00000610348 SHROOM4Q9ULL8 1493 aa45.09■■■■■ 4.81
CDH24-206ENST00000610348 DCAF1Q9Y4B6 1507 aa44.67■■■■■ 4.74
CDH24-206ENST00000610348 ABCC9O60706 1549 aa44.39■■■■■ 4.7
CDH24-206ENST00000610348 DCAF8L2P0C7V8 631 aa44.28■■■■■ 4.68
CDH24-206ENST00000610348 SUPT5HO00267 1087 aaKnown RBP44.06■■■■■ 4.64
CDH24-206ENST00000610348 MYO15BQ96JP2 1530 aa43.62■■■■■ 4.57
CDH24-206ENST00000610348 NACADO15069 1562 aa43.4■■■■■ 4.54
CDH24-206ENST00000610348 RB1CC1Q8TDY2 1594 aa43.13■■■■■ 4.5
CDH24-206ENST00000610348 SCRIBQ14160 1630 aa42.97■■■■■ 4.47
CDH24-206ENST00000610348 CHIC1Q5VXU3 224 aa42.87■■■■■ 4.45
CDH24-206ENST00000610348 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
CDH24-206ENST00000610348 RSF1Q96T23 1441 aaPredicted RBP42.44■■■■■ 4.38
CDH24-206ENST00000610348 BICRAQ9NZM4 1560 aa41.94■■■■■ 4.3
CDH24-206ENST00000610348 CECR2Q9BXF3 1484 aa41.89■■■■■ 4.3
CDH24-206ENST00000610348 MROH2BQ7Z745 1585 aa41.81■■■■■ 4.28
CDH24-206ENST00000610348 PABPN1Q86U42 306 aaKnown RBP eCLIP41.79■■■■■ 4.28
CDH24-206ENST00000610348 BAZ1AQ9NRL2 1556 aaPredicted RBP41.63■■■■■ 4.25
CDH24-206ENST00000610348 WIZO95785 1651 aa41.55■■■■■ 4.24
CDH24-206ENST00000610348 TRIM41Q8WV44 630 aa41.33■■■■■ 4.21
CDH24-206ENST00000610348 LOC105371045A0A1W2PR82 267 aa41.29■■■■■ 4.2
CDH24-206ENST00000610348 SMARCA4P51532 1647 aa41.26■■■■■ 4.2
CDH24-206ENST00000610348 TOP2AP11388 1531 aaKnown RBP41.14■■■■■ 4.18
CDH24-206ENST00000610348 EIF4G1Q04637 1599 aaKnown RBP41■■■■■ 4.15
CDH24-206ENST00000610348 PCGF6Q9BYE7 350 aa40.86■■■■■ 4.13
CDH24-206ENST00000610348 SMARCA2P51531 1590 aa40.8■■■■■ 4.12
CDH24-206ENST00000610348 HRCP23327 699 aa40.79■■■■■ 4.12
CDH24-206ENST00000610348 CCDC88BA6NC98 1476 aa40.75■■■■■ 4.11
CDH24-206ENST00000610348 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
CDH24-206ENST00000610348 FAM9AQ8IZU1 332 aaPredicted RBP40.61■■■■■ 4.09
CDH24-206ENST00000610348 TRIM26Q12899 539 aaPredicted RBP40.53■■■■■ 4.08
CDH24-206ENST00000610348 ATAD2BQ9ULI0 1458 aa40.36■■■■■ 4.05
CDH24-206ENST00000610348 ABCC8Q09428 1581 aa40.34■■■■■ 4.05
CDH24-206ENST00000610348 CC2D2AQ9P2K1 1620 aa40.18■■■■■ 4.02
CDH24-206ENST00000610348 BAZ1BQ9UIG0 1483 aaKnown RBP40.12■■■■■ 4.01
CDH24-206ENST00000610348 EEA1Q15075 1411 aa40.09■■■■■ 4.01
CDH24-206ENST00000610348 NCAPD3P42695 1498 aa40.05■■■■■ 4
CDH24-206ENST00000610348 EHMT2Q96KQ7 1210 aa40■■■■□ 3.99
CDH24-206ENST00000610348 HMGXB3Q12766 1538 aa39.97■■■■□ 3.99
CDH24-206ENST00000610348 WRNQ14191 1432 aaPredicted RBP eCLIP39.92■■■■□ 3.985e-6■■■■■ 29.2
CDH24-206ENST00000610348 SOGA1O94964 1423 aa39.86■■■■□ 3.97
CDH24-206ENST00000610348 CSRNP3Q8WYN3 585 aa39.74■■■■□ 3.95
CDH24-206ENST00000610348 TNIKQ9UKE5 1360 aa39.73■■■■□ 3.95
CDH24-206ENST00000610348 SYNJ1O43426 1573 aa39.7■■■■□ 3.95
CDH24-206ENST00000610348 ZEB1P37275 1124 aaPredicted RBP39.65■■■■□ 3.94
CDH24-206ENST00000610348 RUSC2Q8N2Y8 1516 aa39.62■■■■□ 3.93
CDH24-206ENST00000610348 CEP162Q5TB80 1403 aa39.62■■■■□ 3.93
CDH24-206ENST00000610348 GOLGA3Q08378 1498 aa39.59■■■■□ 3.93
CDH24-206ENST00000610348 PPARGC1BQ86YN6 1023 aaKnown RBP39.58■■■■□ 3.93
CDH24-206ENST00000610348 DNAJC5BQ9UF47 199 aa39.57■■■■□ 3.93
CDH24-206ENST00000610348 KIF21BO75037 1637 aa39.48■■■■□ 3.91
CDH24-206ENST00000610348 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
CDH24-206ENST00000610348 TOP2BQ02880 1626 aa39.44■■■■□ 3.9
CDH24-206ENST00000610348 UBTFP17480 764 aaKnown RBP39.38■■■■□ 3.89
CDH24-206ENST00000610348 BIVM-ERCC5R4GMW8 1640 aa39.37■■■■□ 3.89
CDH24-206ENST00000610348 CFTRP13569 1480 aa39.16■■■■□ 3.86
CDH24-206ENST00000610348 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
CDH24-206ENST00000610348 CLIP1P30622 1438 aa39.01■■■■□ 3.83
CDH24-206ENST00000610348 CUX1P39880 1505 aa39■■■■□ 3.83
CDH24-206ENST00000610348 RAPGEF2Q9Y4G8 1499 aa39■■■■□ 3.83
CDH24-206ENST00000610348 CADPSQ9ULU8 1353 aa38.99■■■■□ 3.83
CDH24-206ENST00000610348 ERICH3Q5RHP9 1530 aa38.97■■■■□ 3.83
CDH24-206ENST00000610348 NESP48681 1621 aa38.89■■■■□ 3.82
CDH24-206ENST00000610348 PRXQ9BXM0 1461 aa38.87■■■■□ 3.81
CDH24-206ENST00000610348 VPS8Q8N3P4 1428 aa38.85■■■■□ 3.81
CDH24-206ENST00000610348 KIF27Q86VH2 1401 aa38.81■■■■□ 3.8
CDH24-206ENST00000610348 LAMC3Q9Y6N6 1575 aa38.77■■■■□ 3.8
CDH24-206ENST00000610348 CCER1Q8TC90 406 aaPredicted RBP38.72■■■■□ 3.79
CDH24-206ENST00000610348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.67■■■■□ 3.78
CDH24-206ENST00000610348 TTBK1Q5TCY1 1321 aaPredicted RBP38.67■■■■□ 3.78
CDH24-206ENST00000610348 FANCD2Q9BXW9 1451 aa38.59■■■■□ 3.77
CDH24-206ENST00000610348 APLP2Q06481 763 aa38.57■■■■□ 3.77
CDH24-206ENST00000610348 KIF21AQ7Z4S6 1674 aa38.47■■■■□ 3.75
CDH24-206ENST00000610348 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
CDH24-206ENST00000610348 PDS5BQ9NTI5 1447 aa38.43■■■■□ 3.74
CDH24-206ENST00000610348 CUX2O14529 1486 aa38.4■■■■□ 3.74
CDH24-206ENST00000610348 FGD5Q6ZNL6 1462 aa38.38■■■■□ 3.73
CDH24-206ENST00000610348 RANGAP1P46060 587 aaPredicted RBP38.33■■■■□ 3.73
CDH24-206ENST00000610348 IGF1RP08069 1367 aa38.31■■■■□ 3.72
CDH24-206ENST00000610348 DNMBPQ6XZF7 1577 aa38.24■■■■□ 3.71
CDH24-206ENST00000610348 URB2Q14146 1524 aaKnown RBP38.18■■■■□ 3.7
CDH24-206ENST00000610348 ARHGAP35Q9NRY4 1499 aa38.17■■■■□ 3.7
CDH24-206ENST00000610348 CARMIL1Q5VZK9 1371 aa38.15■■■■□ 3.7
CDH24-206ENST00000610348 TOPBP1Q92547 1522 aa38.15■■■■□ 3.7
CDH24-206ENST00000610348 HNRNPUL2Q1KMD3 747 aaKnown RBP38.09■■■■□ 3.69
CDH24-206ENST00000610348 ABCA10Q8WWZ4 1543 aa38.07■■■■□ 3.68
CDH24-206ENST00000610348 ERCC6Q03468 1493 aa38.03■■■■□ 3.68
CDH24-206ENST00000610348 MRC2Q9UBG0 1479 aa38■■■■□ 3.67
CDH24-206ENST00000610348 POLA1P09884 1462 aaPredicted RBP37.99■■■■□ 3.67
CDH24-206ENST00000610348 MAP3K1Q13233 1512 aa37.95■■■■□ 3.67
CDH24-206ENST00000610348 RRBP1Q9P2E9 1410 aaKnown RBP37.92■■■■□ 3.66
CDH24-206ENST00000610348 CUL7Q14999 1698 aa37.91■■■■□ 3.66
CDH24-206ENST00000610348 KANK4Q5T7N3 995 aaPredicted RBP37.91■■■■□ 3.66
CDH24-206ENST00000610348 RAD54L2Q9Y4B4 1467 aa37.89■■■■□ 3.66
CDH24-206ENST00000610348 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
CDH24-206ENST00000610348 WDR62O43379 1518 aa37.84■■■■□ 3.65
CDH24-206ENST00000610348 WDR97A6NE52 1622 aa37.8■■■■□ 3.64
CDH24-206ENST00000610348 FHAD1B1AJZ9 1412 aa37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms