RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 NISCHQ9Y2I1 1504 aa55.52■■■■■ 6.48
ACAA1-220ENST00000627515 CCDC180Q9P1Z9 1646 aa48.19■■■■■ 5.31
ACAA1-220ENST00000627515 ZCCHC6Q5VYS8 1495 aaKnown RBP46.75■■■■■ 5.07
ACAA1-220ENST00000627515 DCAF1Q9Y4B6 1507 aa45.86■■■■■ 4.93
ACAA1-220ENST00000627515 SHROOM4Q9ULL8 1493 aa45.74■■■■■ 4.91
ACAA1-220ENST00000627515 DCAF8L2P0C7V8 631 aa45.72■■■■■ 4.91
ACAA1-220ENST00000627515 ABCC9O60706 1549 aa45.12■■■■■ 4.81
ACAA1-220ENST00000627515 MYO15BQ96JP2 1530 aa45.1■■■■■ 4.81
ACAA1-220ENST00000627515 NACADO15069 1562 aa44.72■■■■■ 4.75
ACAA1-220ENST00000627515 SCRIBQ14160 1630 aa44.46■■■■■ 4.71
ACAA1-220ENST00000627515 SUPT5HO00267 1087 aaKnown RBP44.24■■■■■ 4.67
ACAA1-220ENST00000627515 RB1CC1Q8TDY2 1594 aa44.24■■■■■ 4.67
ACAA1-220ENST00000627515 UNC13AQ9UPW8 1703 aa43.51■■■■■ 4.56
ACAA1-220ENST00000627515 RSF1Q96T23 1441 aaPredicted RBP43.26■■■■■ 4.52
ACAA1-220ENST00000627515 CECR2Q9BXF3 1484 aa43.12■■■■■ 4.49
ACAA1-220ENST00000627515 MROH2BQ7Z745 1585 aa42.94■■■■■ 4.46
ACAA1-220ENST00000627515 BICRAQ9NZM4 1560 aa42.92■■■■■ 4.46
ACAA1-220ENST00000627515 BAZ1AQ9NRL2 1556 aaPredicted RBP42.83■■■■■ 4.45
ACAA1-220ENST00000627515 WIZO95785 1651 aa42.68■■■■■ 4.42
ACAA1-220ENST00000627515 PABPN1Q86U42 306 aaKnown RBP eCLIP42.64■■■■■ 4.421e-7■□□□□ 9.6
ACAA1-220ENST00000627515 SMARCA4P51532 1647 aa42.61■■■■■ 4.41
ACAA1-220ENST00000627515 CHIC1Q5VXU3 224 aa42.58■■■■■ 4.41
ACAA1-220ENST00000627515 TOP2AP11388 1531 aaKnown RBP42.18■■■■■ 4.34
ACAA1-220ENST00000627515 PEG3Q9GZU2 1588 aa42.02■■■■■ 4.32
ACAA1-220ENST00000627515 SMARCA2P51531 1590 aa41.83■■■■■ 4.29
ACAA1-220ENST00000627515 CCDC88BA6NC98 1476 aa41.76■■■■■ 4.28
ACAA1-220ENST00000627515 ATAD2BQ9ULI0 1458 aa41.73■■■■■ 4.27
ACAA1-220ENST00000627515 EIF4G1Q04637 1599 aaKnown RBP41.72■■■■■ 4.27
ACAA1-220ENST00000627515 BAZ1BQ9UIG0 1483 aaKnown RBP41.55■■■■■ 4.24
ACAA1-220ENST00000627515 TRIM41Q8WV44 630 aa41.52■■■■■ 4.24
ACAA1-220ENST00000627515 HMGXB3Q12766 1538 aa41.28■■■■■ 4.2
ACAA1-220ENST00000627515 NCAPD3P42695 1498 aa41.24■■■■■ 4.19
ACAA1-220ENST00000627515 ABCC8Q09428 1581 aa41.12■■■■■ 4.17
ACAA1-220ENST00000627515 LOC105371045A0A1W2PR82 267 aa41.01■■■■■ 4.16
ACAA1-220ENST00000627515 CC2D2AQ9P2K1 1620 aa40.86■■■■■ 4.13
ACAA1-220ENST00000627515 FAM9AQ8IZU1 332 aaPredicted RBP40.83■■■■■ 4.13
ACAA1-220ENST00000627515 WRNQ14191 1432 aaPredicted RBP eCLIP40.72■■■■■ 4.11
ACAA1-220ENST00000627515 SYNJ1O43426 1573 aa40.59■■■■■ 4.09
ACAA1-220ENST00000627515 CFTRP13569 1480 aa40.5■■■■■ 4.07
ACAA1-220ENST00000627515 PRDM2Q13029 1718 aa40.47■■■■■ 4.07
ACAA1-220ENST00000627515 SOGA1O94964 1423 aa40.41■■■■■ 4.06
ACAA1-220ENST00000627515 EEA1Q15075 1411 aa40.38■■■■■ 4.05
ACAA1-220ENST00000627515 TOP2BQ02880 1626 aa40.36■■■■■ 4.05
ACAA1-220ENST00000627515 BIVM-ERCC5R4GMW8 1640 aa40.32■■■■■ 4.05
ACAA1-220ENST00000627515 EHMT2Q96KQ7 1210 aa40.28■■■■■ 4.04
ACAA1-220ENST00000627515 CADPSQ9ULU8 1353 aa40.24■■■■■ 4.03
ACAA1-220ENST00000627515 RUSC2Q8N2Y8 1516 aa40.23■■■■■ 4.03
ACAA1-220ENST00000627515 CUX1P39880 1505 aa40.13■■■■■ 4.01
ACAA1-220ENST00000627515 CSRNP3Q8WYN3 585 aa40.11■■■■■ 4.01
ACAA1-220ENST00000627515 KIF21BO75037 1637 aa39.9■■■■□ 3.98
ACAA1-220ENST00000627515 GOLGA3Q08378 1498 aa39.89■■■■□ 3.98
ACAA1-220ENST00000627515 FANCD2Q9BXW9 1451 aa39.84■■■■□ 3.97
ACAA1-220ENST00000627515 CEP164Q9UPV0 1460 aa39.84■■■■□ 3.97
ACAA1-220ENST00000627515 TNIKQ9UKE5 1360 aa39.83■■■■□ 3.97
ACAA1-220ENST00000627515 LAMC3Q9Y6N6 1575 aa39.81■■■■□ 3.96
ACAA1-220ENST00000627515 NESP48681 1621 aa39.79■■■■□ 3.96
ACAA1-220ENST00000627515 CEP162Q5TB80 1403 aa39.72■■■■□ 3.95
ACAA1-220ENST00000627515 PCGF6Q9BYE7 350 aa39.71■■■■□ 3.95
ACAA1-220ENST00000627515 UBTFP17480 764 aaKnown RBP39.69■■■■□ 3.94
ACAA1-220ENST00000627515 KIF27Q86VH2 1401 aa39.63■■■■□ 3.94
ACAA1-220ENST00000627515 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
ACAA1-220ENST00000627515 FGD5Q6ZNL6 1462 aa39.6■■■■□ 3.93
ACAA1-220ENST00000627515 DNMBPQ6XZF7 1577 aa39.6■■■■□ 3.93
ACAA1-220ENST00000627515 RAPGEF2Q9Y4G8 1499 aa39.57■■■■□ 3.93
ACAA1-220ENST00000627515 TRIM26Q12899 539 aaPredicted RBP39.53■■■■□ 3.92
ACAA1-220ENST00000627515 ERICH3Q5RHP9 1530 aa39.51■■■■□ 3.92
ACAA1-220ENST00000627515 PRXQ9BXM0 1461 aa39.49■■■■□ 3.91
ACAA1-220ENST00000627515 TOPBP1Q92547 1522 aa39.47■■■■□ 3.91
ACAA1-220ENST00000627515 PDS5BQ9NTI5 1447 aa39.45■■■■□ 3.91
ACAA1-220ENST00000627515 CUX2O14529 1486 aa39.44■■■■□ 3.9
ACAA1-220ENST00000627515 KIF21AQ7Z4S6 1674 aa39.38■■■■□ 3.89
ACAA1-220ENST00000627515 POLA1P09884 1462 aaPredicted RBP39.33■■■■□ 3.89
ACAA1-220ENST00000627515 URB2Q14146 1524 aaKnown RBP39.32■■■■□ 3.89
ACAA1-220ENST00000627515 CLIP1P30622 1438 aa39.28■■■■□ 3.88
ACAA1-220ENST00000627515 ABCA10Q8WWZ4 1543 aa39.23■■■■□ 3.87
ACAA1-220ENST00000627515 RAD54L2Q9Y4B4 1467 aa39.21■■■■□ 3.87
ACAA1-220ENST00000627515 IGF1RP08069 1367 aa39.2■■■■□ 3.87
ACAA1-220ENST00000627515 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
ACAA1-220ENST00000627515 PPARGC1BQ86YN6 1023 aaKnown RBP39.09■■■■□ 3.85
ACAA1-220ENST00000627515 CARMIL1Q5VZK9 1371 aa39.04■■■■□ 3.84
ACAA1-220ENST00000627515 VPS8Q8N3P4 1428 aa39.01■■■■□ 3.83
ACAA1-220ENST00000627515 HRCP23327 699 aa38.97■■■■□ 3.83
ACAA1-220ENST00000627515 RANGAP1P46060 587 aaPredicted RBP38.94■■■■□ 3.82
ACAA1-220ENST00000627515 MRC2Q9UBG0 1479 aa38.94■■■■□ 3.82
ACAA1-220ENST00000627515 CUL7Q14999 1698 aa38.94■■■■□ 3.82
ACAA1-220ENST00000627515 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
ACAA1-220ENST00000627515 TARBP1Q13395 1621 aaKnown RBP38.86■■■■□ 3.81
ACAA1-220ENST00000627515 ARAP1Q96P48 1450 aa38.84■■■■□ 3.81
ACAA1-220ENST00000627515 GAPVD1Q14C86 1478 aa38.77■■■■□ 3.8
ACAA1-220ENST00000627515 TDRD9Q8NDG6 1382 aaKnown RBP38.77■■■■□ 3.8
ACAA1-220ENST00000627515 WDR62O43379 1518 aa38.73■■■■□ 3.79
ACAA1-220ENST00000627515 ARHGAP35Q9NRY4 1499 aa38.72■■■■□ 3.79
ACAA1-220ENST00000627515 TTBK1Q5TCY1 1321 aaPredicted RBP38.7■■■■□ 3.79
ACAA1-220ENST00000627515 CTTNBP2Q8WZ74 1663 aa38.64■■■■□ 3.78
ACAA1-220ENST00000627515 ERCC6Q03468 1493 aa38.63■■■■□ 3.77
ACAA1-220ENST00000627515 PBRM1Q86U86 1689 aa38.61■■■■□ 3.77
ACAA1-220ENST00000627515 APLP2Q06481 763 aa38.61■■■■□ 3.77
ACAA1-220ENST00000627515 IFT140Q96RY7 1462 aa38.53■■■■□ 3.76
ACAA1-220ENST00000627515 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
ACAA1-220ENST00000627515 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.748e-7■■■■□ 26.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms