RNA–Protein interactions for RNA: ENST00000221891.8

APLP1-201, Transcript of amyloid beta precursor like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLP1, Length 2,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP1-201ENST00000221891 NISCHQ9Y2I1 1504 aa55.68■■■■■ 6.5
APLP1-201ENST00000221891 CCDC180Q9P1Z9 1646 aa48.21■■■■■ 5.31
APLP1-201ENST00000221891 ZCCHC6Q5VYS8 1495 aaKnown RBP46.82■■■■■ 5.09
APLP1-201ENST00000221891 DCAF8L2P0C7V8 631 aa46.31■■■■■ 5
APLP1-201ENST00000221891 SHROOM4Q9ULL8 1493 aa46.12■■■■■ 4.97
APLP1-201ENST00000221891 DCAF1Q9Y4B6 1507 aa45.8■■■■■ 4.92
APLP1-201ENST00000221891 ABCC9O60706 1549 aa45.69■■■■■ 4.9
APLP1-201ENST00000221891 MYO15BQ96JP2 1530 aa45.06■■■■■ 4.8
APLP1-201ENST00000221891 NACADO15069 1562 aa44.84■■■■■ 4.77
APLP1-201ENST00000221891 SCRIBQ14160 1630 aa44.74■■■■■ 4.75
APLP1-201ENST00000221891 SUPT5HO00267 1087 aaKnown RBP44.5■■■■■ 4.71
APLP1-201ENST00000221891 RB1CC1Q8TDY2 1594 aa44.44■■■■■ 4.7
APLP1-201ENST00000221891 UNC13AQ9UPW8 1703 aa43.78■■■■■ 4.6
APLP1-201ENST00000221891 CECR2Q9BXF3 1484 aa43.44■■■■■ 4.55
APLP1-201ENST00000221891 RSF1Q96T23 1441 aaPredicted RBP43.41■■■■■ 4.54
APLP1-201ENST00000221891 PABPN1Q86U42 306 aaKnown RBP eCLIP43.27■■■■■ 4.52
APLP1-201ENST00000221891 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
APLP1-201ENST00000221891 MROH2BQ7Z745 1585 aa43.17■■■■■ 4.5
APLP1-201ENST00000221891 BAZ1AQ9NRL2 1556 aaPredicted RBP42.91■■■■■ 4.46
APLP1-201ENST00000221891 WIZO95785 1651 aa42.88■■■■■ 4.46
APLP1-201ENST00000221891 SMARCA4P51532 1647 aa42.75■■■■■ 4.43
APLP1-201ENST00000221891 CHIC1Q5VXU3 224 aa42.61■■■■■ 4.41
APLP1-201ENST00000221891 TOP2AP11388 1531 aaKnown RBP42.23■■■■■ 4.35
APLP1-201ENST00000221891 PEG3Q9GZU2 1588 aa42.06■■■■■ 4.32
APLP1-201ENST00000221891 ATAD2BQ9ULI0 1458 aa41.97■■■■■ 4.31
APLP1-201ENST00000221891 SMARCA2P51531 1590 aa41.94■■■■■ 4.3
APLP1-201ENST00000221891 CCDC88BA6NC98 1476 aa41.93■■■■■ 4.3
APLP1-201ENST00000221891 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
APLP1-201ENST00000221891 BAZ1BQ9UIG0 1483 aaKnown RBP41.76■■■■■ 4.28
APLP1-201ENST00000221891 TRIM41Q8WV44 630 aa41.63■■■■■ 4.25
APLP1-201ENST00000221891 NCAPD3P42695 1498 aa41.45■■■■■ 4.23
APLP1-201ENST00000221891 HMGXB3Q12766 1538 aa41.38■■■■■ 4.21
APLP1-201ENST00000221891 ABCC8Q09428 1581 aa41.32■■■■■ 4.21
APLP1-201ENST00000221891 CC2D2AQ9P2K1 1620 aa41.24■■■■■ 4.19
APLP1-201ENST00000221891 LOC105371045A0A1W2PR82 267 aa41.21■■■■■ 4.19
APLP1-201ENST00000221891 FAM9AQ8IZU1 332 aaPredicted RBP41.14■■■■■ 4.18
APLP1-201ENST00000221891 WRNQ14191 1432 aaPredicted RBP eCLIP40.83■■■■■ 4.13
APLP1-201ENST00000221891 EHMT2Q96KQ7 1210 aa40.76■■■■■ 4.12
APLP1-201ENST00000221891 SYNJ1O43426 1573 aa40.73■■■■■ 4.11
APLP1-201ENST00000221891 CFTRP13569 1480 aa40.68■■■■■ 4.1
APLP1-201ENST00000221891 SOGA1O94964 1423 aa40.59■■■■■ 4.09
APLP1-201ENST00000221891 CADPSQ9ULU8 1353 aa40.49■■■■■ 4.07
APLP1-201ENST00000221891 RUSC2Q8N2Y8 1516 aa40.48■■■■■ 4.07
APLP1-201ENST00000221891 DNAJC5BQ9UF47 199 aa40.45■■■■■ 4.07
APLP1-201ENST00000221891 PRDM2Q13029 1718 aa40.43■■■■■ 4.06
APLP1-201ENST00000221891 TOP2BQ02880 1626 aa40.4■■■■■ 4.06
APLP1-201ENST00000221891 BIVM-ERCC5R4GMW8 1640 aa40.32■■■■■ 4.04
APLP1-201ENST00000221891 CUX1P39880 1505 aa40.3■■■■■ 4.04
APLP1-201ENST00000221891 NESP48681 1621 aa40.26■■■■■ 4.04
APLP1-201ENST00000221891 EEA1Q15075 1411 aa40.21■■■■■ 4.03
APLP1-201ENST00000221891 CSRNP3Q8WYN3 585 aa40.21■■■■■ 4.03
APLP1-201ENST00000221891 FANCD2Q9BXW9 1451 aa40.1■■■■■ 4.01
APLP1-201ENST00000221891 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
APLP1-201ENST00000221891 UBTFP17480 764 aaKnown RBP39.86■■■■□ 3.97
APLP1-201ENST00000221891 GOLGA3Q08378 1498 aa39.84■■■■□ 3.97
APLP1-201ENST00000221891 FGD5Q6ZNL6 1462 aa39.81■■■■□ 3.96
APLP1-201ENST00000221891 CEP164Q9UPV0 1460 aa39.78■■■■□ 3.96
APLP1-201ENST00000221891 KIF21BO75037 1637 aa39.78■■■■□ 3.96
APLP1-201ENST00000221891 TNIKQ9UKE5 1360 aa39.76■■■■□ 3.96
APLP1-201ENST00000221891 DNMBPQ6XZF7 1577 aa39.71■■■■□ 3.95
APLP1-201ENST00000221891 KIF27Q86VH2 1401 aa39.71■■■■□ 3.95
APLP1-201ENST00000221891 CEP162Q5TB80 1403 aa39.7■■■■□ 3.95
APLP1-201ENST00000221891 RAPGEF2Q9Y4G8 1499 aa39.7■■■■□ 3.95
APLP1-201ENST00000221891 TOPBP1Q92547 1522 aa39.69■■■■□ 3.94
APLP1-201ENST00000221891 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
APLP1-201ENST00000221891 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
APLP1-201ENST00000221891 PCGF6Q9BYE7 350 aa39.65■■■■□ 3.94
APLP1-201ENST00000221891 CUX2O14529 1486 aa39.64■■■■□ 3.94
APLP1-201ENST00000221891 URB2Q14146 1524 aaKnown RBP39.62■■■■□ 3.93
APLP1-201ENST00000221891 POLA1P09884 1462 aaPredicted RBP39.56■■■■□ 3.92
APLP1-201ENST00000221891 RAD54L2Q9Y4B4 1467 aa39.55■■■■□ 3.92
APLP1-201ENST00000221891 PRXQ9BXM0 1461 aa39.54■■■■□ 3.92
APLP1-201ENST00000221891 ERICH3Q5RHP9 1530 aa39.41■■■■□ 3.9
APLP1-201ENST00000221891 PPARGC1BQ86YN6 1023 aaKnown RBP39.4■■■■□ 3.9
APLP1-201ENST00000221891 IGF1RP08069 1367 aa39.39■■■■□ 3.9
APLP1-201ENST00000221891 RANGAP1P46060 587 aaPredicted RBP39.39■■■■□ 3.9
APLP1-201ENST00000221891 ABCA10Q8WWZ4 1543 aa39.34■■■■□ 3.89
APLP1-201ENST00000221891 TRIM26Q12899 539 aaPredicted RBP39.31■■■■□ 3.88
APLP1-201ENST00000221891 CLIP1P30622 1438 aa39.29■■■■□ 3.88
APLP1-201ENST00000221891 WDR97A6NE52 1622 aa39.21■■■■□ 3.87
APLP1-201ENST00000221891 CARMIL1Q5VZK9 1371 aa39.19■■■■□ 3.86
APLP1-201ENST00000221891 MRC2Q9UBG0 1479 aa39.18■■■■□ 3.86
APLP1-201ENST00000221891 TDRD9Q8NDG6 1382 aaKnown RBP39.15■■■■□ 3.86
APLP1-201ENST00000221891 TARBP1Q13395 1621 aaKnown RBP39.06■■■■□ 3.84
APLP1-201ENST00000221891 TTBK1Q5TCY1 1321 aaPredicted RBP39.05■■■■□ 3.84
APLP1-201ENST00000221891 ERCC6Q03468 1493 aa39.04■■■■□ 3.84
APLP1-201ENST00000221891 ABCA5Q8WWZ7 1642 aa39.03■■■■□ 3.84
APLP1-201ENST00000221891 GAPVD1Q14C86 1478 aa38.98■■■■□ 3.83
APLP1-201ENST00000221891 WDR62O43379 1518 aa38.94■■■■□ 3.82
APLP1-201ENST00000221891 VPS8Q8N3P4 1428 aa38.94■■■■□ 3.82
APLP1-201ENST00000221891 CUL7Q14999 1698 aa38.92■■■■□ 3.82
APLP1-201ENST00000221891 ARAP1Q96P48 1450 aa38.87■■■■□ 3.81
APLP1-201ENST00000221891 AQRO60306 1485 aaKnown RBP eCLIP38.83■■■■□ 3.81
APLP1-201ENST00000221891 THOC2Q8NI27 1593 aaKnown RBP38.81■■■■□ 3.8
APLP1-201ENST00000221891 ARHGAP35Q9NRY4 1499 aa38.81■■■■□ 3.8
APLP1-201ENST00000221891 ZNF608Q9ULD9 1512 aaPredicted RBP38.75■■■■□ 3.79
APLP1-201ENST00000221891 PBRM1Q86U86 1689 aa38.73■■■■□ 3.79
APLP1-201ENST00000221891 IFT140Q96RY7 1462 aa38.71■■■■□ 3.79
APLP1-201ENST00000221891 CTTNBP2Q8WZ74 1663 aa38.63■■■■□ 3.77
APLP1-201ENST00000221891 HRCP23327 699 aa38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms