RNA–Protein interactions for RNA: ENST00000510882.3

HDGFL1-201, Transcript of HDGF like 1, humanhuman

APPRIS P1 BASIC

Gene HDGFL1, Length 2,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL1-201ENST00000510882 NISCHQ9Y2I1 1504 aa54.61■■■■■ 6.33
HDGFL1-201ENST00000510882 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
HDGFL1-201ENST00000510882 ZCCHC6Q5VYS8 1495 aaKnown RBP46.04■■■■■ 4.96
HDGFL1-201ENST00000510882 SHROOM4Q9ULL8 1493 aa45.34■■■■■ 4.85
HDGFL1-201ENST00000510882 DCAF1Q9Y4B6 1507 aa45.07■■■■■ 4.81
HDGFL1-201ENST00000510882 DCAF8L2P0C7V8 631 aa45.01■■■■■ 4.8
HDGFL1-201ENST00000510882 MYO15BQ96JP2 1530 aa44.18■■■■■ 4.66
HDGFL1-201ENST00000510882 SUPT5HO00267 1087 aaKnown RBP44.05■■■■■ 4.64
HDGFL1-201ENST00000510882 ABCC9O60706 1549 aa43.98■■■■■ 4.63
HDGFL1-201ENST00000510882 NACADO15069 1562 aa43.73■■■■■ 4.59
HDGFL1-201ENST00000510882 SCRIBQ14160 1630 aa43.64■■■■■ 4.58
HDGFL1-201ENST00000510882 RB1CC1Q8TDY2 1594 aa43.18■■■■■ 4.5
HDGFL1-201ENST00000510882 RSF1Q96T23 1441 aaPredicted RBP42.74■■■■■ 4.43
HDGFL1-201ENST00000510882 CHIC1Q5VXU3 224 aa42.55■■■■■ 4.4
HDGFL1-201ENST00000510882 UNC13AQ9UPW8 1703 aa42.44■■■■■ 4.39
HDGFL1-201ENST00000510882 CECR2Q9BXF3 1484 aa42.44■■■■■ 4.38
HDGFL1-201ENST00000510882 MROH2BQ7Z745 1585 aa42.28■■■■■ 4.36
HDGFL1-201ENST00000510882 BAZ1AQ9NRL2 1556 aaPredicted RBP42.09■■■■■ 4.33
HDGFL1-201ENST00000510882 WIZO95785 1651 aa42.02■■■■■ 4.32
HDGFL1-201ENST00000510882 BICRAQ9NZM4 1560 aa41.9■■■■■ 4.3
HDGFL1-201ENST00000510882 SMARCA4P51532 1647 aa41.82■■■■■ 4.28
HDGFL1-201ENST00000510882 PABPN1Q86U42 306 aaKnown RBP eCLIP41.7■■■■■ 4.27
HDGFL1-201ENST00000510882 TOP2AP11388 1531 aaKnown RBP41.52■■■■■ 4.24
HDGFL1-201ENST00000510882 TRIM41Q8WV44 630 aa41.29■■■■■ 4.2
HDGFL1-201ENST00000510882 PEG3Q9GZU2 1588 aa41.21■■■■■ 4.19
HDGFL1-201ENST00000510882 SMARCA2P51531 1590 aa41.19■■■■■ 4.18
HDGFL1-201ENST00000510882 EIF4G1Q04637 1599 aaKnown RBP41.18■■■■■ 4.18
HDGFL1-201ENST00000510882 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
HDGFL1-201ENST00000510882 LOC105371045A0A1W2PR82 267 aa41.04■■■■■ 4.16
HDGFL1-201ENST00000510882 ATAD2BQ9ULI0 1458 aa40.91■■■■■ 4.14
HDGFL1-201ENST00000510882 BAZ1BQ9UIG0 1483 aaKnown RBP40.75■■■■■ 4.11
HDGFL1-201ENST00000510882 FAM9AQ8IZU1 332 aaPredicted RBP40.65■■■■■ 4.1
HDGFL1-201ENST00000510882 ABCC8Q09428 1581 aa40.62■■■■■ 4.09
HDGFL1-201ENST00000510882 HMGXB3Q12766 1538 aa40.38■■■■■ 4.05
HDGFL1-201ENST00000510882 NCAPD3P42695 1498 aa40.37■■■■■ 4.05
HDGFL1-201ENST00000510882 WRNQ14191 1432 aaPredicted RBP eCLIP40.2■■■■■ 4.03
HDGFL1-201ENST00000510882 EHMT2Q96KQ7 1210 aa40.13■■■■■ 4.01
HDGFL1-201ENST00000510882 PCGF6Q9BYE7 350 aa40.08■■■■■ 4.01
HDGFL1-201ENST00000510882 SOGA1O94964 1423 aa40.03■■■■■ 4
HDGFL1-201ENST00000510882 SYNJ1O43426 1573 aa40.02■■■■■ 4
HDGFL1-201ENST00000510882 EEA1Q15075 1411 aa40.01■■■■■ 4
HDGFL1-201ENST00000510882 RUSC2Q8N2Y8 1516 aa39.85■■■■□ 3.97
HDGFL1-201ENST00000510882 CSRNP3Q8WYN3 585 aa39.8■■■■□ 3.96
HDGFL1-201ENST00000510882 TRIM26Q12899 539 aaPredicted RBP39.79■■■■□ 3.96
HDGFL1-201ENST00000510882 CC2D2AQ9P2K1 1620 aa39.78■■■■□ 3.96
HDGFL1-201ENST00000510882 TOP2BQ02880 1626 aa39.75■■■■□ 3.95
HDGFL1-201ENST00000510882 CFTRP13569 1480 aa39.74■■■■□ 3.95
HDGFL1-201ENST00000510882 BIVM-ERCC5R4GMW8 1640 aa39.68■■■■□ 3.94
HDGFL1-201ENST00000510882 PRDM2Q13029 1718 aa39.61■■■■□ 3.93
HDGFL1-201ENST00000510882 TNIKQ9UKE5 1360 aa39.6■■■■□ 3.93
HDGFL1-201ENST00000510882 HRCP23327 699 aa39.58■■■■□ 3.93
HDGFL1-201ENST00000510882 GOLGA3Q08378 1498 aa39.56■■■■□ 3.92
HDGFL1-201ENST00000510882 KIF21BO75037 1637 aa39.49■■■■□ 3.91
HDGFL1-201ENST00000510882 CEP162Q5TB80 1403 aa39.49■■■■□ 3.91
HDGFL1-201ENST00000510882 CUX1P39880 1505 aa39.46■■■■□ 3.91
HDGFL1-201ENST00000510882 CEP164Q9UPV0 1460 aa39.46■■■■□ 3.91
HDGFL1-201ENST00000510882 CADPSQ9ULU8 1353 aa39.44■■■■□ 3.9
HDGFL1-201ENST00000510882 UBTFP17480 764 aaKnown RBP39.43■■■■□ 3.9
HDGFL1-201ENST00000510882 RAPGEF2Q9Y4G8 1499 aa39.16■■■■□ 3.86
HDGFL1-201ENST00000510882 PPARGC1BQ86YN6 1023 aaKnown RBP39.1■■■■□ 3.85
HDGFL1-201ENST00000510882 KIF27Q86VH2 1401 aa39.09■■■■□ 3.85
HDGFL1-201ENST00000510882 ERICH3Q5RHP9 1530 aa39.05■■■■□ 3.84
HDGFL1-201ENST00000510882 PRXQ9BXM0 1461 aa39.03■■■■□ 3.84
HDGFL1-201ENST00000510882 FANCD2Q9BXW9 1451 aa39.03■■■■□ 3.84
HDGFL1-201ENST00000510882 CLIP1P30622 1438 aa38.98■■■■□ 3.83
HDGFL1-201ENST00000510882 FGD5Q6ZNL6 1462 aa38.9■■■■□ 3.82
HDGFL1-201ENST00000510882 NESP48681 1621 aa38.89■■■■□ 3.82
HDGFL1-201ENST00000510882 LAMC3Q9Y6N6 1575 aa38.86■■■■□ 3.81
HDGFL1-201ENST00000510882 CUX2O14529 1486 aa38.83■■■■□ 3.81
HDGFL1-201ENST00000510882 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
HDGFL1-201ENST00000510882 VPS8Q8N3P4 1428 aa38.74■■■■□ 3.79
HDGFL1-201ENST00000510882 TOPBP1Q92547 1522 aa38.7■■■■□ 3.79
HDGFL1-201ENST00000510882 IGF1RP08069 1367 aa38.67■■■■□ 3.78
HDGFL1-201ENST00000510882 TTBK1Q5TCY1 1321 aaPredicted RBP38.63■■■■□ 3.77
HDGFL1-201ENST00000510882 RANGAP1P46060 587 aaPredicted RBP38.63■■■■□ 3.77
HDGFL1-201ENST00000510882 ZEB1P37275 1124 aaPredicted RBP38.61■■■■□ 3.77
HDGFL1-201ENST00000510882 DNAJC5BQ9UF47 199 aa38.61■■■■□ 3.77
HDGFL1-201ENST00000510882 POLA1P09884 1462 aaPredicted RBP38.58■■■■□ 3.77
HDGFL1-201ENST00000510882 PDS5BQ9NTI5 1447 aa38.56■■■■□ 3.76
HDGFL1-201ENST00000510882 ABCA10Q8WWZ4 1543 aa38.54■■■■□ 3.76
HDGFL1-201ENST00000510882 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.76
HDGFL1-201ENST00000510882 URB2Q14146 1524 aaKnown RBP38.5■■■■□ 3.75
HDGFL1-201ENST00000510882 CARMIL1Q5VZK9 1371 aa38.5■■■■□ 3.75
HDGFL1-201ENST00000510882 ARAP1Q96P48 1450 aa38.49■■■■□ 3.75
HDGFL1-201ENST00000510882 APLP2Q06481 763 aa38.44■■■■□ 3.74
HDGFL1-201ENST00000510882 KIF21AQ7Z4S6 1674 aa38.41■■■■□ 3.74
HDGFL1-201ENST00000510882 WDR97A6NE52 1622 aa38.34■■■■□ 3.73
HDGFL1-201ENST00000510882 ARHGAP35Q9NRY4 1499 aa38.32■■■■□ 3.72
HDGFL1-201ENST00000510882 CUL7Q14999 1698 aa38.27■■■■□ 3.72
HDGFL1-201ENST00000510882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.17■■■■□ 3.7
HDGFL1-201ENST00000510882 ABCA5Q8WWZ7 1642 aa38.16■■■■□ 3.7
HDGFL1-201ENST00000510882 CCER1Q8TC90 406 aaPredicted RBP38.12■■■■□ 3.69
HDGFL1-201ENST00000510882 TDRD9Q8NDG6 1382 aaKnown RBP38.07■■■■□ 3.68
HDGFL1-201ENST00000510882 GAPVD1Q14C86 1478 aa38.06■■■■□ 3.68
HDGFL1-201ENST00000510882 TARBP1Q13395 1621 aaKnown RBP38.04■■■■□ 3.68
HDGFL1-201ENST00000510882 MRC2Q9UBG0 1479 aa38.02■■■■□ 3.68
HDGFL1-201ENST00000510882 CTTNBP2Q8WZ74 1663 aa38.01■■■■□ 3.68
HDGFL1-201ENST00000510882 KANK4Q5T7N3 995 aaPredicted RBP37.96■■■■□ 3.67
HDGFL1-201ENST00000510882 EFCAB5A4FU69 1503 aa37.9■■■■□ 3.66
HDGFL1-201ENST00000510882 HNRNPUL2Q1KMD3 747 aaKnown RBP37.87■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms