Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SPCS1Q9Y6A9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SPCS1Q9Y6A9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SPCS1Q9Y6A9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPCS1Q9Y6A9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPCS1Q9Y6A9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPCS1Q9Y6A9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.87■■□□□ 1.25
SPCS1Q9Y6A9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPCS1Q9Y6A9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.72■■□□□ 1.23
SPCS1Q9Y6A9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SPCS1Q9Y6A9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPCS1Q9Y6A9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPCS1Q9Y6A9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPCS1Q9Y6A9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPCS1Q9Y6A9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPCS1Q9Y6A9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.92■■□□□ 1.1
SPCS1Q9Y6A9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SPCS1Q9Y6A9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPCS1Q9Y6A9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPCS1Q9Y6A9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPCS1Q9Y6A9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPCS1Q9Y6A9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPCS1Q9Y6A9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPCS1Q9Y6A9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPCS1Q9Y6A9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SPCS1Q9Y6A9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPCS1Q9Y6A9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SPCS1Q9Y6A9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPCS1Q9Y6A9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
SPCS1Q9Y6A9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SPCS1Q9Y6A9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SPCS1Q9Y6A9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPCS1Q9Y6A9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SPCS1Q9Y6A9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPCS1Q9Y6A9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SPCS1Q9Y6A9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPCS1Q9Y6A9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.16■□□□□ 0.98
SPCS1Q9Y6A9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPCS1Q9Y6A9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPCS1Q9Y6A9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPCS1Q9Y6A9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPCS1Q9Y6A9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPCS1Q9Y6A9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPCS1Q9Y6A9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.08■□□□□ 0.97
SPCS1Q9Y6A9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SPCS1Q9Y6A9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPCS1Q9Y6A9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPCS1Q9Y6A9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.01■□□□□ 0.95
SPCS1Q9Y6A9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPCS1Q9Y6A9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPCS1Q9Y6A9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPCS1Q9Y6A9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPCS1Q9Y6A9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPCS1Q9Y6A9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SPCS1Q9Y6A9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPCS1Q9Y6A9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPCS1Q9Y6A9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS1Q9Y6A9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS1Q9Y6A9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.81■□□□□ 0.92
SPCS1Q9Y6A9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPCS1Q9Y6A9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.79■□□□□ 0.92
SPCS1Q9Y6A9 AL161658.1-201ENST00000623641 1967 ntBASIC20.79■□□□□ 0.92
SPCS1Q9Y6A9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS1Q9Y6A9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS1Q9Y6A9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS1Q9Y6A9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS1Q9Y6A9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS1Q9Y6A9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPCS1Q9Y6A9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPCS1Q9Y6A9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPCS1Q9Y6A9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.55■□□□□ 0.88
SPCS1Q9Y6A9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPCS1Q9Y6A9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS1Q9Y6A9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS1Q9Y6A9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SPCS1Q9Y6A9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPCS1Q9Y6A9 AC139426.1-201ENST00000568218 2529 ntBASIC20.46■□□□□ 0.87
SPCS1Q9Y6A9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPCS1Q9Y6A9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.43■□□□□ 0.86
SPCS1Q9Y6A9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.42■□□□□ 0.86
SPCS1Q9Y6A9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SPCS1Q9Y6A9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS1Q9Y6A9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPCS1Q9Y6A9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SPCS1Q9Y6A9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS1Q9Y6A9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPCS1Q9Y6A9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SPCS1Q9Y6A9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPCS1Q9Y6A9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SPCS1Q9Y6A9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.3■□□□□ 0.84
SPCS1Q9Y6A9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPCS1Q9Y6A9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.25■□□□□ 0.83
SPCS1Q9Y6A9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPCS1Q9Y6A9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.16■□□□□ 0.82
SPCS1Q9Y6A9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS1Q9Y6A9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPCS1Q9Y6A9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms