Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SPCS1Q9Y6A9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SPCS1Q9Y6A9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SPCS1Q9Y6A9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPCS1Q9Y6A9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPCS1Q9Y6A9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SPCS1Q9Y6A9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.87■■□□□ 1.25
SPCS1Q9Y6A9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPCS1Q9Y6A9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.72■■□□□ 1.23
SPCS1Q9Y6A9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SPCS1Q9Y6A9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPCS1Q9Y6A9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPCS1Q9Y6A9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPCS1Q9Y6A9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPCS1Q9Y6A9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPCS1Q9Y6A9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.92■■□□□ 1.1
SPCS1Q9Y6A9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SPCS1Q9Y6A9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPCS1Q9Y6A9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPCS1Q9Y6A9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SPCS1Q9Y6A9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPCS1Q9Y6A9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPCS1Q9Y6A9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPCS1Q9Y6A9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPCS1Q9Y6A9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SPCS1Q9Y6A9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPCS1Q9Y6A9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SPCS1Q9Y6A9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPCS1Q9Y6A9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
SPCS1Q9Y6A9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SPCS1Q9Y6A9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SPCS1Q9Y6A9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPCS1Q9Y6A9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SPCS1Q9Y6A9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPCS1Q9Y6A9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SPCS1Q9Y6A9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPCS1Q9Y6A9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.16■□□□□ 0.98
SPCS1Q9Y6A9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPCS1Q9Y6A9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.15■□□□□ 0.98
SPCS1Q9Y6A9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPCS1Q9Y6A9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPCS1Q9Y6A9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPCS1Q9Y6A9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPCS1Q9Y6A9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPCS1Q9Y6A9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.08■□□□□ 0.97
SPCS1Q9Y6A9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SPCS1Q9Y6A9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPCS1Q9Y6A9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPCS1Q9Y6A9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.01■□□□□ 0.95
SPCS1Q9Y6A9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPCS1Q9Y6A9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPCS1Q9Y6A9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPCS1Q9Y6A9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPCS1Q9Y6A9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPCS1Q9Y6A9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SPCS1Q9Y6A9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPCS1Q9Y6A9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPCS1Q9Y6A9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS1Q9Y6A9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS1Q9Y6A9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.81■□□□□ 0.92
SPCS1Q9Y6A9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPCS1Q9Y6A9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.79■□□□□ 0.92
SPCS1Q9Y6A9 AL161658.1-201ENST00000623641 1967 ntBASIC20.79■□□□□ 0.92
SPCS1Q9Y6A9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS1Q9Y6A9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS1Q9Y6A9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS1Q9Y6A9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS1Q9Y6A9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS1Q9Y6A9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPCS1Q9Y6A9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPCS1Q9Y6A9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPCS1Q9Y6A9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.55■□□□□ 0.88
SPCS1Q9Y6A9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPCS1Q9Y6A9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS1Q9Y6A9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS1Q9Y6A9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SPCS1Q9Y6A9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPCS1Q9Y6A9 AC139426.1-201ENST00000568218 2529 ntBASIC20.46■□□□□ 0.87
SPCS1Q9Y6A9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPCS1Q9Y6A9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.43■□□□□ 0.86
SPCS1Q9Y6A9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.42■□□□□ 0.86
SPCS1Q9Y6A9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SPCS1Q9Y6A9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPCS1Q9Y6A9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPCS1Q9Y6A9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SPCS1Q9Y6A9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPCS1Q9Y6A9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPCS1Q9Y6A9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SPCS1Q9Y6A9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPCS1Q9Y6A9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SPCS1Q9Y6A9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.3■□□□□ 0.84
SPCS1Q9Y6A9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPCS1Q9Y6A9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.25■□□□□ 0.83
SPCS1Q9Y6A9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPCS1Q9Y6A9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.16■□□□□ 0.82
SPCS1Q9Y6A9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS1Q9Y6A9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPCS1Q9Y6A9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms