Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSNK1G1Q9HCP0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CSNK1G1Q9HCP0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CSNK1G1Q9HCP0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.87■■□□□ 1.89
CSNK1G1Q9HCP0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CSNK1G1Q9HCP0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 AC008813.1-201ENST00000536597 885 ntBASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CSNK1G1Q9HCP0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CSNK1G1Q9HCP0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.85■■□□□ 1.89
CSNK1G1Q9HCP0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CSNK1G1Q9HCP0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CSNK1G1Q9HCP0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSNK1G1Q9HCP0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.84■■□□□ 1.89
CSNK1G1Q9HCP0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSNK1G1Q9HCP0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CSNK1G1Q9HCP0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
CSNK1G1Q9HCP0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CSNK1G1Q9HCP0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSNK1G1Q9HCP0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.81■■□□□ 1.88
CSNK1G1Q9HCP0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.81■■□□□ 1.88
CSNK1G1Q9HCP0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
CSNK1G1Q9HCP0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSNK1G1Q9HCP0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.81■■□□□ 1.88
CSNK1G1Q9HCP0 AC139426.1-201ENST00000568218 2529 ntBASIC26.8■■□□□ 1.88
CSNK1G1Q9HCP0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSNK1G1Q9HCP0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.8■■□□□ 1.88
CSNK1G1Q9HCP0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.8■■□□□ 1.88
CSNK1G1Q9HCP0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSNK1G1Q9HCP0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CSNK1G1Q9HCP0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CSNK1G1Q9HCP0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CSNK1G1Q9HCP0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CSNK1G1Q9HCP0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.78■■□□□ 1.88
CSNK1G1Q9HCP0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CSNK1G1Q9HCP0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
CSNK1G1Q9HCP0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.76■■□□□ 1.87
CSNK1G1Q9HCP0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CSNK1G1Q9HCP0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CSNK1G1Q9HCP0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.75■■□□□ 1.87
CSNK1G1Q9HCP0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CSNK1G1Q9HCP0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CSNK1G1Q9HCP0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CSNK1G1Q9HCP0 AP002414.2-202ENST00000590929 1450 ntBASIC26.74■■□□□ 1.87
CSNK1G1Q9HCP0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CSNK1G1Q9HCP0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CSNK1G1Q9HCP0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CSNK1G1Q9HCP0 AC148477.6-201ENST00000623746 465 ntBASIC26.73■■□□□ 1.87
CSNK1G1Q9HCP0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CSNK1G1Q9HCP0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CSNK1G1Q9HCP0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.72■■□□□ 1.87
CSNK1G1Q9HCP0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.72■■□□□ 1.87
CSNK1G1Q9HCP0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.72■■□□□ 1.87
CSNK1G1Q9HCP0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.72■■□□□ 1.87
CSNK1G1Q9HCP0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G1Q9HCP0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CSNK1G1Q9HCP0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CSNK1G1Q9HCP0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
CSNK1G1Q9HCP0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CSNK1G1Q9HCP0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CSNK1G1Q9HCP0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CSNK1G1Q9HCP0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.68■■□□□ 1.86
CSNK1G1Q9HCP0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CSNK1G1Q9HCP0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.68■■□□□ 1.86
CSNK1G1Q9HCP0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CSNK1G1Q9HCP0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.67■■□□□ 1.86
CSNK1G1Q9HCP0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CSNK1G1Q9HCP0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CSNK1G1Q9HCP0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G1Q9HCP0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSNK1G1Q9HCP0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSNK1G1Q9HCP0 MIR219A2-201ENST00000608502 1504 ntBASIC26.65■■□□□ 1.86
CSNK1G1Q9HCP0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms