Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.3■■■■□ 3.4
CSNK1G1Q9HCP0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CSNK1G1Q9HCP0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.21■■■■□ 3.23
CSNK1G1Q9HCP0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CSNK1G1Q9HCP0 AL356512.1-201ENST00000607453 1739 ntBASIC35.19■■■■□ 3.22
CSNK1G1Q9HCP0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CSNK1G1Q9HCP0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.06■■■■□ 3.2
CSNK1G1Q9HCP0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.54■■■■□ 3.12
CSNK1G1Q9HCP0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.4■■■■□ 3.1
CSNK1G1Q9HCP0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.24■■■■□ 3.07
CSNK1G1Q9HCP0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.22■■■■□ 3.07
CSNK1G1Q9HCP0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.93■■■■□ 3.02
CSNK1G1Q9HCP0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.89■■■■□ 3.02
CSNK1G1Q9HCP0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.76■■■□□ 2.99
CSNK1G1Q9HCP0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.74■■■□□ 2.99
CSNK1G1Q9HCP0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CSNK1G1Q9HCP0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
CSNK1G1Q9HCP0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.54■■■□□ 2.96
CSNK1G1Q9HCP0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
CSNK1G1Q9HCP0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.39■■■□□ 2.94
CSNK1G1Q9HCP0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
CSNK1G1Q9HCP0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CSNK1G1Q9HCP0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CSNK1G1Q9HCP0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CSNK1G1Q9HCP0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CSNK1G1Q9HCP0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CSNK1G1Q9HCP0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CSNK1G1Q9HCP0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CSNK1G1Q9HCP0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CSNK1G1Q9HCP0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CSNK1G1Q9HCP0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CSNK1G1Q9HCP0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.46■■■□□ 2.79
CSNK1G1Q9HCP0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.41■■■□□ 2.78
CSNK1G1Q9HCP0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.4■■■□□ 2.78
CSNK1G1Q9HCP0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.38■■■□□ 2.77
CSNK1G1Q9HCP0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.33■■■□□ 2.77
CSNK1G1Q9HCP0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CSNK1G1Q9HCP0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
CSNK1G1Q9HCP0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
CSNK1G1Q9HCP0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CSNK1G1Q9HCP0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
CSNK1G1Q9HCP0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.09■■■□□ 2.73
CSNK1G1Q9HCP0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CSNK1G1Q9HCP0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
CSNK1G1Q9HCP0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
CSNK1G1Q9HCP0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.02■■■□□ 2.72
CSNK1G1Q9HCP0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CSNK1G1Q9HCP0 AC015813.7-201ENST00000623294 581 ntBASIC32■■■□□ 2.71
CSNK1G1Q9HCP0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CSNK1G1Q9HCP0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CSNK1G1Q9HCP0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.7■■■□□ 2.67
CSNK1G1Q9HCP0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CSNK1G1Q9HCP0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CSNK1G1Q9HCP0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.69■■■□□ 2.66
CSNK1G1Q9HCP0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CSNK1G1Q9HCP0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.66■■■□□ 2.66
CSNK1G1Q9HCP0 AC006077.2-201ENST00000623591 457 ntBASIC31.63■■■□□ 2.65
CSNK1G1Q9HCP0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.58■■■□□ 2.65
CSNK1G1Q9HCP0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CSNK1G1Q9HCP0 ZNRF2P1-201ENST00000441407 443 ntBASIC31.48■■■□□ 2.63
CSNK1G1Q9HCP0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CSNK1G1Q9HCP0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CSNK1G1Q9HCP0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CSNK1G1Q9HCP0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CSNK1G1Q9HCP0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.3■■■□□ 2.6
CSNK1G1Q9HCP0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CSNK1G1Q9HCP0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CSNK1G1Q9HCP0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CSNK1G1Q9HCP0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CSNK1G1Q9HCP0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CSNK1G1Q9HCP0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CSNK1G1Q9HCP0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CSNK1G1Q9HCP0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CSNK1G1Q9HCP0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CSNK1G1Q9HCP0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CSNK1G1Q9HCP0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.95■■■□□ 2.55
CSNK1G1Q9HCP0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CSNK1G1Q9HCP0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CSNK1G1Q9HCP0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CSNK1G1Q9HCP0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CSNK1G1Q9HCP0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CSNK1G1Q9HCP0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.86■■■□□ 2.53
CSNK1G1Q9HCP0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CSNK1G1Q9HCP0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CSNK1G1Q9HCP0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CSNK1G1Q9HCP0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CSNK1G1Q9HCP0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.79■■■□□ 2.52
CSNK1G1Q9HCP0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.76■■■□□ 2.51
CSNK1G1Q9HCP0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.76■■■□□ 2.51
CSNK1G1Q9HCP0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CSNK1G1Q9HCP0 AP002365.1-201ENST00000603448 772 ntBASIC30.71■■■□□ 2.51
CSNK1G1Q9HCP0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CSNK1G1Q9HCP0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CSNK1G1Q9HCP0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
CSNK1G1Q9HCP0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.61■■■□□ 2.49
CSNK1G1Q9HCP0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
CSNK1G1Q9HCP0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.61■■■□□ 2.49
CSNK1G1Q9HCP0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CSNK1G1Q9HCP0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.57■■■□□ 2.48
CSNK1G1Q9HCP0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms