Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 AL139393.2-201ENST00000608721 2025 ntBASIC25.86■■□□□ 1.73
GRIN3AQ8TCU5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
GRIN3AQ8TCU5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
GRIN3AQ8TCU5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
GRIN3AQ8TCU5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.85■■□□□ 1.73
GRIN3AQ8TCU5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.85■■□□□ 1.73
GRIN3AQ8TCU5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.85■■□□□ 1.73
GRIN3AQ8TCU5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
GRIN3AQ8TCU5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
GRIN3AQ8TCU5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
GRIN3AQ8TCU5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
GRIN3AQ8TCU5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.84■■□□□ 1.73
GRIN3AQ8TCU5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
GRIN3AQ8TCU5 AP004833.2-201ENST00000532228 1454 ntBASIC25.82■■□□□ 1.72
GRIN3AQ8TCU5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
GRIN3AQ8TCU5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
GRIN3AQ8TCU5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
GRIN3AQ8TCU5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
GRIN3AQ8TCU5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.81■■□□□ 1.72
GRIN3AQ8TCU5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
GRIN3AQ8TCU5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
GRIN3AQ8TCU5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
GRIN3AQ8TCU5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 AC100797.4-201ENST00000631653 1827 ntBASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.79■■□□□ 1.72
GRIN3AQ8TCU5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
GRIN3AQ8TCU5 AC139426.1-201ENST00000568218 2529 ntBASIC25.78■■□□□ 1.72
GRIN3AQ8TCU5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
GRIN3AQ8TCU5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
GRIN3AQ8TCU5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
GRIN3AQ8TCU5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
GRIN3AQ8TCU5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
GRIN3AQ8TCU5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
GRIN3AQ8TCU5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.74■■□□□ 1.71
GRIN3AQ8TCU5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
GRIN3AQ8TCU5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
GRIN3AQ8TCU5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
GRIN3AQ8TCU5 AC008813.1-201ENST00000536597 885 ntBASIC25.72■■□□□ 1.71
GRIN3AQ8TCU5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.72■■□□□ 1.71
GRIN3AQ8TCU5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
GRIN3AQ8TCU5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.71■■□□□ 1.71
GRIN3AQ8TCU5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.71■■□□□ 1.71
GRIN3AQ8TCU5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.7■■□□□ 1.71
GRIN3AQ8TCU5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
GRIN3AQ8TCU5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.7■■□□□ 1.71
GRIN3AQ8TCU5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GRIN3AQ8TCU5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
GRIN3AQ8TCU5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.69■■□□□ 1.7
GRIN3AQ8TCU5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.69■■□□□ 1.7
GRIN3AQ8TCU5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.69■■□□□ 1.7
GRIN3AQ8TCU5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
GRIN3AQ8TCU5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
GRIN3AQ8TCU5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
GRIN3AQ8TCU5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
GRIN3AQ8TCU5 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.67■■□□□ 1.7
GRIN3AQ8TCU5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.67■■□□□ 1.7
GRIN3AQ8TCU5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
GRIN3AQ8TCU5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
GRIN3AQ8TCU5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
GRIN3AQ8TCU5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
GRIN3AQ8TCU5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 HSD17B1P1-201ENST00000590052 955 ntBASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.64■■□□□ 1.7
GRIN3AQ8TCU5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
GRIN3AQ8TCU5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms