Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.03■■□□□ 1.76
MT-CO1P00395 AC110285.7-201ENST00000624417 1536 ntBASIC26.03■■□□□ 1.76
MT-CO1P00395 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MT-CO1P00395 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MT-CO1P00395 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
MT-CO1P00395 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.02■■□□□ 1.76
MT-CO1P00395 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MT-CO1P00395 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.02■■□□□ 1.76
MT-CO1P00395 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MT-CO1P00395 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MT-CO1P00395 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.01■■□□□ 1.75
MT-CO1P00395 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26■■□□□ 1.75
MT-CO1P00395 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
MT-CO1P00395 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
MT-CO1P00395 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
MT-CO1P00395 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.99■■□□□ 1.75
MT-CO1P00395 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MT-CO1P00395 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.98■■□□□ 1.75
MT-CO1P00395 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.98■■□□□ 1.75
MT-CO1P00395 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
MT-CO1P00395 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.97■■□□□ 1.75
MT-CO1P00395 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
MT-CO1P00395 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MT-CO1P00395 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.96■■□□□ 1.75
MT-CO1P00395 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
MT-CO1P00395 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.95■■□□□ 1.74
MT-CO1P00395 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
MT-CO1P00395 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MT-CO1P00395 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.94■■□□□ 1.74
MT-CO1P00395 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
MT-CO1P00395 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MT-CO1P00395 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
MT-CO1P00395 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
MT-CO1P00395 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
MT-CO1P00395 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MT-CO1P00395 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MT-CO1P00395 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
MT-CO1P00395 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.93■■□□□ 1.74
MT-CO1P00395 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.93■■□□□ 1.74
MT-CO1P00395 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.93■■□□□ 1.74
MT-CO1P00395 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.93■■□□□ 1.74
MT-CO1P00395 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MT-CO1P00395 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
MT-CO1P00395 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
MT-CO1P00395 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
MT-CO1P00395 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
MT-CO1P00395 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.92■■□□□ 1.74
MT-CO1P00395 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
MT-CO1P00395 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
MT-CO1P00395 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.9■■□□□ 1.74
MT-CO1P00395 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
MT-CO1P00395 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
MT-CO1P00395 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
MT-CO1P00395 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
MT-CO1P00395 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
MT-CO1P00395 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
MT-CO1P00395 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.89■■□□□ 1.74
MT-CO1P00395 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
MT-CO1P00395 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
MT-CO1P00395 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
MT-CO1P00395 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
MT-CO1P00395 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
MT-CO1P00395 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
MT-CO1P00395 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
MT-CO1P00395 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
MT-CO1P00395 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
MT-CO1P00395 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
MT-CO1P00395 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
MT-CO1P00395 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
MT-CO1P00395 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.86■■□□□ 1.73
MT-CO1P00395 AC008813.1-201ENST00000536597 885 ntBASIC25.85■■□□□ 1.73
MT-CO1P00395 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
MT-CO1P00395 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.85■■□□□ 1.73
MT-CO1P00395 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
MT-CO1P00395 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
MT-CO1P00395 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.84■■□□□ 1.73
MT-CO1P00395 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
MT-CO1P00395 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.83■■□□□ 1.73
MT-CO1P00395 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
MT-CO1P00395 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
MT-CO1P00395 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
MT-CO1P00395 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
MT-CO1P00395 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
MT-CO1P00395 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
MT-CO1P00395 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
MT-CO1P00395 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
MT-CO1P00395 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.8■■□□□ 1.72
MT-CO1P00395 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.79■■□□□ 1.72
MT-CO1P00395 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.79■■□□□ 1.72
MT-CO1P00395 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.79■■□□□ 1.72
MT-CO1P00395 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
MT-CO1P00395 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms