Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CRNKL1Q9BZJ0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CRNKL1Q9BZJ0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.79■■■□□ 2.52
CRNKL1Q9BZJ0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CRNKL1Q9BZJ0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CRNKL1Q9BZJ0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.76■■■□□ 2.52
CRNKL1Q9BZJ0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.76■■■□□ 2.51
CRNKL1Q9BZJ0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CRNKL1Q9BZJ0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.75■■■□□ 2.51
CRNKL1Q9BZJ0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.75■■■□□ 2.51
CRNKL1Q9BZJ0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CRNKL1Q9BZJ0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CRNKL1Q9BZJ0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.74■■■□□ 2.51
CRNKL1Q9BZJ0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CRNKL1Q9BZJ0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CRNKL1Q9BZJ0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CRNKL1Q9BZJ0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.72■■■□□ 2.51
CRNKL1Q9BZJ0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CRNKL1Q9BZJ0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CRNKL1Q9BZJ0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CRNKL1Q9BZJ0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.71■■■□□ 2.51
CRNKL1Q9BZJ0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
CRNKL1Q9BZJ0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CRNKL1Q9BZJ0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CRNKL1Q9BZJ0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
CRNKL1Q9BZJ0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
CRNKL1Q9BZJ0 AP004833.2-201ENST00000532228 1454 ntBASIC30.7■■■□□ 2.5
CRNKL1Q9BZJ0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CRNKL1Q9BZJ0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.69■■■□□ 2.5
CRNKL1Q9BZJ0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CRNKL1Q9BZJ0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CRNKL1Q9BZJ0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.67■■■□□ 2.5
CRNKL1Q9BZJ0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CRNKL1Q9BZJ0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.67■■■□□ 2.5
CRNKL1Q9BZJ0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.67■■■□□ 2.5
CRNKL1Q9BZJ0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CRNKL1Q9BZJ0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CRNKL1Q9BZJ0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRNKL1Q9BZJ0 AC110285.7-201ENST00000624417 1536 ntBASIC30.65■■■□□ 2.5
CRNKL1Q9BZJ0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRNKL1Q9BZJ0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CRNKL1Q9BZJ0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CRNKL1Q9BZJ0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
CRNKL1Q9BZJ0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CRNKL1Q9BZJ0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CRNKL1Q9BZJ0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CRNKL1Q9BZJ0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.62■■■□□ 2.49
CRNKL1Q9BZJ0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.62■■■□□ 2.49
CRNKL1Q9BZJ0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.61■■■□□ 2.49
CRNKL1Q9BZJ0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
CRNKL1Q9BZJ0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.6■■■□□ 2.49
CRNKL1Q9BZJ0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CRNKL1Q9BZJ0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CRNKL1Q9BZJ0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.59■■■□□ 2.49
CRNKL1Q9BZJ0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRNKL1Q9BZJ0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRNKL1Q9BZJ0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRNKL1Q9BZJ0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CRNKL1Q9BZJ0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CRNKL1Q9BZJ0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CRNKL1Q9BZJ0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CRNKL1Q9BZJ0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CRNKL1Q9BZJ0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CRNKL1Q9BZJ0 AL139393.2-201ENST00000608721 2025 ntBASIC30.57■■■□□ 2.49
CRNKL1Q9BZJ0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CRNKL1Q9BZJ0 AC008813.1-201ENST00000536597 885 ntBASIC30.57■■■□□ 2.48
CRNKL1Q9BZJ0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CRNKL1Q9BZJ0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
CRNKL1Q9BZJ0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CRNKL1Q9BZJ0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CRNKL1Q9BZJ0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CRNKL1Q9BZJ0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CRNKL1Q9BZJ0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CRNKL1Q9BZJ0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.54■■■□□ 2.48
CRNKL1Q9BZJ0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.53■■■□□ 2.48
CRNKL1Q9BZJ0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CRNKL1Q9BZJ0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.52■■■□□ 2.48
CRNKL1Q9BZJ0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.52■■■□□ 2.48
CRNKL1Q9BZJ0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CRNKL1Q9BZJ0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CRNKL1Q9BZJ0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CRNKL1Q9BZJ0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CRNKL1Q9BZJ0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
CRNKL1Q9BZJ0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CRNKL1Q9BZJ0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.5■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms