Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.92■■■□□ 2.38
PCDHA6Q9UN73 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHA6Q9UN73 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
PCDHA6Q9UN73 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHA6Q9UN73 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.91■■■□□ 2.38
PCDHA6Q9UN73 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHA6Q9UN73 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.9■■■□□ 2.38
PCDHA6Q9UN73 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHA6Q9UN73 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHA6Q9UN73 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.88■■■□□ 2.37
PCDHA6Q9UN73 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
PCDHA6Q9UN73 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDHA6Q9UN73 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PCDHA6Q9UN73 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDHA6Q9UN73 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA6Q9UN73 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA6Q9UN73 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHA6Q9UN73 AC127502.1-201ENST00000399971 1502 ntBASIC29.86■■■□□ 2.37
PCDHA6Q9UN73 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
PCDHA6Q9UN73 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA6Q9UN73 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.85■■■□□ 2.37
PCDHA6Q9UN73 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA6Q9UN73 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.85■■■□□ 2.37
PCDHA6Q9UN73 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHA6Q9UN73 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
PCDHA6Q9UN73 MIR7108-201ENST00000614319 87 ntBASIC29.84■■■□□ 2.37
PCDHA6Q9UN73 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
PCDHA6Q9UN73 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHA6Q9UN73 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
PCDHA6Q9UN73 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.83■■■□□ 2.37
PCDHA6Q9UN73 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.83■■■□□ 2.37
PCDHA6Q9UN73 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
PCDHA6Q9UN73 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
PCDHA6Q9UN73 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDHA6Q9UN73 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
PCDHA6Q9UN73 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
PCDHA6Q9UN73 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
PCDHA6Q9UN73 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PCDHA6Q9UN73 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHA6Q9UN73 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHA6Q9UN73 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHA6Q9UN73 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHA6Q9UN73 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 ABCB10P3-201ENST00000561950 2166 ntBASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.78■■■□□ 2.36
PCDHA6Q9UN73 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHA6Q9UN73 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.77■■■□□ 2.36
PCDHA6Q9UN73 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PCDHA6Q9UN73 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDHA6Q9UN73 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHA6Q9UN73 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHA6Q9UN73 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
PCDHA6Q9UN73 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHA6Q9UN73 AL139393.2-201ENST00000608721 2025 ntBASIC29.72■■■□□ 2.35
PCDHA6Q9UN73 AC139426.1-201ENST00000568218 2529 ntBASIC29.72■■■□□ 2.35
PCDHA6Q9UN73 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHA6Q9UN73 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
PCDHA6Q9UN73 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHA6Q9UN73 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHA6Q9UN73 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.7■■■□□ 2.35
PCDHA6Q9UN73 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHA6Q9UN73 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHA6Q9UN73 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHA6Q9UN73 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.68■■■□□ 2.34
PCDHA6Q9UN73 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.68■■■□□ 2.34
PCDHA6Q9UN73 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHA6Q9UN73 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHA6Q9UN73 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.66■■■□□ 2.34
PCDHA6Q9UN73 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA6Q9UN73 LINC01971-201ENST00000617888 1048 ntBASIC29.65■■■□□ 2.34
PCDHA6Q9UN73 LINC00273-201ENST00000539813 1452 ntBASIC29.65■■■□□ 2.34
PCDHA6Q9UN73 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHA6Q9UN73 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.63■■■□□ 2.33
PCDHA6Q9UN73 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
PCDHA6Q9UN73 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHA6Q9UN73 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.61■■■□□ 2.33
PCDHA6Q9UN73 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.61■■■□□ 2.33
PCDHA6Q9UN73 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.61■■■□□ 2.33
PCDHA6Q9UN73 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHA6Q9UN73 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDHA6Q9UN73 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.6■■■□□ 2.33
PCDHA6Q9UN73 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHA6Q9UN73 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 DUX4L11-201ENST00000611504 1267 ntBASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 DUX4L12-201ENST00000614593 1267 ntBASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 DUX4L14-201ENST00000621227 1267 ntBASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHA6Q9UN73 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms