Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
TWNKQ96RR1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
TWNKQ96RR1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
TWNKQ96RR1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
TWNKQ96RR1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.72■■■□□ 2.03
TWNKQ96RR1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TWNKQ96RR1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.72■■■□□ 2.03
TWNKQ96RR1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
TWNKQ96RR1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TWNKQ96RR1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
TWNKQ96RR1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.71■■■□□ 2.03
TWNKQ96RR1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TWNKQ96RR1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TWNKQ96RR1 DUX4L29-201ENST00000425409 679 ntBASIC27.71■■■□□ 2.03
TWNKQ96RR1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.71■■■□□ 2.03
TWNKQ96RR1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.7■■■□□ 2.03
TWNKQ96RR1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TWNKQ96RR1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TWNKQ96RR1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.69■■■□□ 2.02
TWNKQ96RR1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TWNKQ96RR1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
TWNKQ96RR1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TWNKQ96RR1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.68■■■□□ 2.02
TWNKQ96RR1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.68■■■□□ 2.02
TWNKQ96RR1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.68■■■□□ 2.02
TWNKQ96RR1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TWNKQ96RR1 AC139426.1-201ENST00000568218 2529 ntBASIC27.68■■■□□ 2.02
TWNKQ96RR1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TWNKQ96RR1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TWNKQ96RR1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TWNKQ96RR1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TWNKQ96RR1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TWNKQ96RR1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
TWNKQ96RR1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TWNKQ96RR1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TWNKQ96RR1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TWNKQ96RR1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TWNKQ96RR1 ABCB10P3-201ENST00000561950 2166 ntBASIC27.65■■■□□ 2.02
TWNKQ96RR1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.64■■■□□ 2.02
TWNKQ96RR1 AL139393.2-201ENST00000608721 2025 ntBASIC27.63■■■□□ 2.01
TWNKQ96RR1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.63■■■□□ 2.01
TWNKQ96RR1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TWNKQ96RR1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TWNKQ96RR1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TWNKQ96RR1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TWNKQ96RR1 ABHD17AP4-201ENST00000411545 909 ntBASIC27.62■■■□□ 2.01
TWNKQ96RR1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TWNKQ96RR1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TWNKQ96RR1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TWNKQ96RR1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TWNKQ96RR1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TWNKQ96RR1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TWNKQ96RR1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.59■■■□□ 2.01
TWNKQ96RR1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.59■■■□□ 2.01
TWNKQ96RR1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
TWNKQ96RR1 LINC00273-201ENST00000539813 1452 ntBASIC27.58■■■□□ 2.01
TWNKQ96RR1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
TWNKQ96RR1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.57■■■□□ 2
TWNKQ96RR1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.57■■■□□ 2
TWNKQ96RR1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.57■■■□□ 2
TWNKQ96RR1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.56■■■□□ 2
TWNKQ96RR1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.56■■■□□ 2
TWNKQ96RR1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.56■■■□□ 2
TWNKQ96RR1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.56■■■□□ 2
TWNKQ96RR1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.55■■■□□ 2
TWNKQ96RR1 ZNRF2P2-203ENST00000454624 420 ntBASIC27.55■■■□□ 2
TWNKQ96RR1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.55■■■□□ 2
TWNKQ96RR1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.54■■■□□ 2
TWNKQ96RR1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.54■■■□□ 2
TWNKQ96RR1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TWNKQ96RR1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
TWNKQ96RR1 AC135983.2-203ENST00000454486 1613 ntBASIC27.53■■■□□ 2
TWNKQ96RR1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.52■■■□□ 2
TWNKQ96RR1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.52■■■□□ 2
TWNKQ96RR1 WHAMMP2-203ENST00000563942 1603 ntBASIC27.52■■■□□ 2
TWNKQ96RR1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
TWNKQ96RR1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.5■■□□□ 1.99
TWNKQ96RR1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.5■■□□□ 1.99
TWNKQ96RR1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
TWNKQ96RR1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
TWNKQ96RR1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.49■■□□□ 1.99
TWNKQ96RR1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.48■■□□□ 1.99
TWNKQ96RR1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.47■■□□□ 1.99
TWNKQ96RR1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TWNKQ96RR1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
TWNKQ96RR1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TWNKQ96RR1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TWNKQ96RR1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.45■■□□□ 1.98
TWNKQ96RR1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TWNKQ96RR1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
TWNKQ96RR1 AP004833.2-201ENST00000532228 1454 ntBASIC27.44■■□□□ 1.98
TWNKQ96RR1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TWNKQ96RR1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TWNKQ96RR1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TWNKQ96RR1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms