Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CWC22Q9HCG8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CWC22Q9HCG8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
CWC22Q9HCG8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CWC22Q9HCG8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CWC22Q9HCG8 AL161658.1-201ENST00000623641 1967 ntBASIC31.65■■■□□ 2.66
CWC22Q9HCG8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CWC22Q9HCG8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CWC22Q9HCG8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
CWC22Q9HCG8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CWC22Q9HCG8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CWC22Q9HCG8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CWC22Q9HCG8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CWC22Q9HCG8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CWC22Q9HCG8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
CWC22Q9HCG8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.59■■■□□ 2.65
CWC22Q9HCG8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CWC22Q9HCG8 HLA-V-202ENST00000446817 847 ntBASIC31.58■■■□□ 2.65
CWC22Q9HCG8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.58■■■□□ 2.65
CWC22Q9HCG8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.58■■■□□ 2.65
CWC22Q9HCG8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CWC22Q9HCG8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
CWC22Q9HCG8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CWC22Q9HCG8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CWC22Q9HCG8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CWC22Q9HCG8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CWC22Q9HCG8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.56■■■□□ 2.64
CWC22Q9HCG8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CWC22Q9HCG8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CWC22Q9HCG8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
CWC22Q9HCG8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CWC22Q9HCG8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CWC22Q9HCG8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.52■■■□□ 2.64
CWC22Q9HCG8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CWC22Q9HCG8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CWC22Q9HCG8 WASH5P-204ENST00000632292 975 ntBASIC31.51■■■□□ 2.63
CWC22Q9HCG8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.51■■■□□ 2.63
CWC22Q9HCG8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.5■■■□□ 2.63
CWC22Q9HCG8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.5■■■□□ 2.63
CWC22Q9HCG8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CWC22Q9HCG8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
CWC22Q9HCG8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
CWC22Q9HCG8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
CWC22Q9HCG8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.48■■■□□ 2.63
CWC22Q9HCG8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CWC22Q9HCG8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.47■■■□□ 2.63
CWC22Q9HCG8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.47■■■□□ 2.63
CWC22Q9HCG8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.47■■■□□ 2.63
CWC22Q9HCG8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CWC22Q9HCG8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CWC22Q9HCG8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CWC22Q9HCG8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
CWC22Q9HCG8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.44■■■□□ 2.62
CWC22Q9HCG8 AL135925.1-201ENST00000605920 1701 ntBASIC31.44■■■□□ 2.62
CWC22Q9HCG8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CWC22Q9HCG8 ZNRF2P2-203ENST00000454624 420 ntBASIC31.43■■■□□ 2.62
CWC22Q9HCG8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CWC22Q9HCG8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CWC22Q9HCG8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.41■■■□□ 2.62
CWC22Q9HCG8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CWC22Q9HCG8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.4■■■□□ 2.62
CWC22Q9HCG8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC22Q9HCG8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC22Q9HCG8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
CWC22Q9HCG8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CWC22Q9HCG8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
CWC22Q9HCG8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CWC22Q9HCG8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CWC22Q9HCG8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CWC22Q9HCG8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CWC22Q9HCG8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CWC22Q9HCG8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CWC22Q9HCG8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CWC22Q9HCG8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CWC22Q9HCG8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CWC22Q9HCG8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CWC22Q9HCG8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CWC22Q9HCG8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CWC22Q9HCG8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CWC22Q9HCG8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.32■■■□□ 2.61
CWC22Q9HCG8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CWC22Q9HCG8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CWC22Q9HCG8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CWC22Q9HCG8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CWC22Q9HCG8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CWC22Q9HCG8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
CWC22Q9HCG8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CWC22Q9HCG8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CWC22Q9HCG8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.3■■■□□ 2.6
CWC22Q9HCG8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CWC22Q9HCG8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CWC22Q9HCG8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CWC22Q9HCG8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.29■■■□□ 2.6
CWC22Q9HCG8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CWC22Q9HCG8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms