Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTTNQ86VV8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTTNQ86VV8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RTTNQ86VV8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
RTTNQ86VV8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RTTNQ86VV8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RTTNQ86VV8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTTNQ86VV8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTTNQ86VV8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTTNQ86VV8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTTNQ86VV8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RTTNQ86VV8 AC005559.1-201ENST00000589661 871 ntBASIC23.05■■□□□ 1.28
RTTNQ86VV8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTTNQ86VV8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTTNQ86VV8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
RTTNQ86VV8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.04■■□□□ 1.28
RTTNQ86VV8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.04■■□□□ 1.28
RTTNQ86VV8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.04■■□□□ 1.28
RTTNQ86VV8 ABCB10P3-201ENST00000561950 2166 ntBASIC23.03■■□□□ 1.28
RTTNQ86VV8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.03■■□□□ 1.28
RTTNQ86VV8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.03■■□□□ 1.28
RTTNQ86VV8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RTTNQ86VV8 MIR3665-201ENST00000578708 105 ntBASIC23.02■■□□□ 1.28
RTTNQ86VV8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTTNQ86VV8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTTNQ86VV8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTTNQ86VV8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RTTNQ86VV8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RTTNQ86VV8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTTNQ86VV8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTTNQ86VV8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.01■■□□□ 1.27
RTTNQ86VV8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTTNQ86VV8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTTNQ86VV8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTTNQ86VV8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RTTNQ86VV8 DUX4L28-201ENST00000623687 678 ntBASIC22.99■■□□□ 1.27
RTTNQ86VV8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTTNQ86VV8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTTNQ86VV8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTTNQ86VV8 AC044849.2-201ENST00000606596 710 ntBASIC22.97■■□□□ 1.27
RTTNQ86VV8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTTNQ86VV8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTTNQ86VV8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTTNQ86VV8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
RTTNQ86VV8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.95■■□□□ 1.27
RTTNQ86VV8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTTNQ86VV8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
RTTNQ86VV8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTTNQ86VV8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTTNQ86VV8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
RTTNQ86VV8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTTNQ86VV8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RTTNQ86VV8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTTNQ86VV8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.93■■□□□ 1.26
RTTNQ86VV8 AC087741.3-201ENST00000624270 1347 ntBASIC22.92■■□□□ 1.26
RTTNQ86VV8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTTNQ86VV8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.92■■□□□ 1.26
RTTNQ86VV8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTTNQ86VV8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTTNQ86VV8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.91■■□□□ 1.26
RTTNQ86VV8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.91■■□□□ 1.26
RTTNQ86VV8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.91■■□□□ 1.26
RTTNQ86VV8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTTNQ86VV8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.26
RTTNQ86VV8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
RTTNQ86VV8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.88■■□□□ 1.25
RTTNQ86VV8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.88■■□□□ 1.25
RTTNQ86VV8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTTNQ86VV8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RTTNQ86VV8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTTNQ86VV8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RTTNQ86VV8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.87■■□□□ 1.25
RTTNQ86VV8 AC010864.1-201ENST00000609407 1511 ntBASIC22.86■■□□□ 1.25
RTTNQ86VV8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTTNQ86VV8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.85■■□□□ 1.25
RTTNQ86VV8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTTNQ86VV8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
RTTNQ86VV8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RTTNQ86VV8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.84■■□□□ 1.25
RTTNQ86VV8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTTNQ86VV8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTTNQ86VV8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTTNQ86VV8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
RTTNQ86VV8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTTNQ86VV8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTTNQ86VV8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTTNQ86VV8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTTNQ86VV8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTTNQ86VV8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms