Protein–RNA interactions for Protein: O14594

NCAN, Neurocan core protein, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCANO14594 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
NCANO14594 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NCANO14594 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCANO14594 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
NCANO14594 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
NCANO14594 AC044849.2-201ENST00000606596 710 ntBASIC28.4■■■□□ 2.14
NCANO14594 MIR7108-201ENST00000614319 87 ntBASIC28.4■■■□□ 2.14
NCANO14594 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NCANO14594 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NCANO14594 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NCANO14594 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCANO14594 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.38■■■□□ 2.13
NCANO14594 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.38■■■□□ 2.13
NCANO14594 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NCANO14594 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
NCANO14594 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
NCANO14594 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NCANO14594 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NCANO14594 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.34■■■□□ 2.13
NCANO14594 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
NCANO14594 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
NCANO14594 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NCANO14594 AC139426.1-201ENST00000568218 2529 ntBASIC28.31■■■□□ 2.12
NCANO14594 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NCANO14594 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.3■■■□□ 2.12
NCANO14594 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
NCANO14594 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NCANO14594 AL135925.1-201ENST00000605920 1701 ntBASIC28.3■■■□□ 2.12
NCANO14594 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NCANO14594 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.29■■■□□ 2.12
NCANO14594 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.29■■■□□ 2.12
NCANO14594 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.28■■■□□ 2.12
NCANO14594 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NCANO14594 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NCANO14594 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NCANO14594 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.26■■■□□ 2.11
NCANO14594 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
NCANO14594 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
NCANO14594 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NCANO14594 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCANO14594 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NCANO14594 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCANO14594 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCANO14594 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCANO14594 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
NCANO14594 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NCANO14594 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCANO14594 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NCANO14594 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NCANO14594 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
NCANO14594 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
NCANO14594 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NCANO14594 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.18■■■□□ 2.1
NCANO14594 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NCANO14594 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NCANO14594 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.18■■■□□ 2.1
NCANO14594 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.18■■■□□ 2.1
NCANO14594 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
NCANO14594 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NCANO14594 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.17■■■□□ 2.1
NCANO14594 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.17■■■□□ 2.1
NCANO14594 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.17■■■□□ 2.1
NCANO14594 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.17■■■□□ 2.1
NCANO14594 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.17■■■□□ 2.1
NCANO14594 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.17■■■□□ 2.1
NCANO14594 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
NCANO14594 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NCANO14594 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NCANO14594 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
NCANO14594 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NCANO14594 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
NCANO14594 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
NCANO14594 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
NCANO14594 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NCANO14594 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
NCANO14594 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
NCANO14594 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.12■■■□□ 2.09
NCANO14594 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.12■■■□□ 2.09
NCANO14594 ZNRF2P2-203ENST00000454624 420 ntBASIC28.12■■■□□ 2.09
NCANO14594 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.12■■■□□ 2.09
NCANO14594 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NCANO14594 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NCANO14594 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.11■■■□□ 2.09
NCANO14594 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.11■■■□□ 2.09
NCANO14594 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.1■■■□□ 2.09
NCANO14594 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.1■■■□□ 2.09
NCANO14594 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NCANO14594 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NCANO14594 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NCANO14594 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.09■■■□□ 2.09
NCANO14594 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
NCANO14594 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NCANO14594 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.08■■■□□ 2.09
NCANO14594 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.08■■■□□ 2.09
NCANO14594 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
NCANO14594 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NCANO14594 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NCANO14594 HLA-V-202ENST00000446817 847 ntBASIC28.06■■■□□ 2.08
NCANO14594 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NCANO14594 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms