Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.731e-13■□□□□ 10.4
XRCC6P12956 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.21■□□□□ 0.831e-13■□□□□ 10.4
XRCC6P12956 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.6■□□□□ 0.571e-13■□□□□ 10.4
XRCC6P12956 UBC-208ENST00000540700 627 ntTSL 218.58■□□□□ 0.561e-13■□□□□ 10.4
XRCC6P12956 UBC-204ENST00000536661 624 ntTSL 216.62■□□□□ 0.251e-13■□□□□ 10.4
XRCC6P12956 UBC-203ENST00000535859 582 ntTSL 215.61■□□□□ 0.091e-13■□□□□ 10.4
XRCC6P12956 UBC-214ENST00000546271 559 ntTSL 413.34□□□□□ -0.271e-13■□□□□ 10.4
XRCC6P12956 UBC-213ENST00000546120 718 ntTSL 5 BASIC12.97□□□□□ -0.331e-13■□□□□ 10.4
XRCC6P12956 UBC-211ENST00000542416 517 ntTSL 49.91□□□□□ -0.821e-13■□□□□ 10.4
XRCC6P12956 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.82e-6■□□□□ 10.4
XRCC6P12956 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.82e-6■□□□□ 10.4
XRCC6P12956 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.742e-6■□□□□ 10.4
XRCC6P12956 ATXN2-204ENST00000392645 2842 ntTSL 217.51■□□□□ 0.392e-6■□□□□ 10.4
XRCC6P12956 ATXN2-218ENST00000549455 568 ntTSL 416.04■□□□□ 0.162e-6■□□□□ 10.4
XRCC6P12956 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.042e-6■□□□□ 10.4
XRCC6P12956 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)13.72□□□□□ -0.212e-6■□□□□ 10.4
XRCC6P12956 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.112e-6■□□□□ 10.4
XRCC6P12956 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.162e-6■□□□□ 10.4
XRCC6P12956 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.292e-6■□□□□ 10.4
XRCC6P12956 ATXN2-217ENST00000548492 556 ntTSL 45.52□□□□□ -1.532e-6■□□□□ 10.4
XRCC6P12956 PNCK-216ENST00000458354 498 ntTSL 332.16■■■□□ 2.749e-7■□□□□ 10.3
XRCC6P12956 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.399e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.299e-7■□□□□ 10.3
XRCC6P12956 TCF3-210ENST00000587235 986 ntTSL 528.09■■■□□ 2.099e-7■□□□□ 10.3
XRCC6P12956 PNCK-227ENST00000475172 877 ntTSL 527.44■■□□□ 1.989e-7■□□□□ 10.3
XRCC6P12956 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.869e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.759e-7■□□□□ 10.3
XRCC6P12956 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.759e-7■□□□□ 10.3
XRCC6P12956 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.759e-7■□□□□ 10.3
XRCC6P12956 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.7■■□□□ 1.719e-7■□□□□ 10.3
XRCC6P12956 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.529e-7■□□□□ 10.3
XRCC6P12956 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.369e-7■□□□□ 10.3
XRCC6P12956 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)23.35■■□□□ 1.339e-7■□□□□ 10.3
XRCC6P12956 PNCK-221ENST00000466074 1564 ntTSL 222.87■■□□□ 1.259e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-203ENST00000376956 690 ntTSL 522.83■■□□□ 1.259e-7■□□□□ 10.3
XRCC6P12956 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.189e-7■□□□□ 10.3
XRCC6P12956 PNCK-218ENST00000462280 704 ntTSL 322.33■■□□□ 1.179e-7■□□□□ 10.3
XRCC6P12956 PNCK-208ENST00000422811 771 ntTSL 322.09■■□□□ 1.139e-7■□□□□ 10.3
XRCC6P12956 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.19e-7■□□□□ 10.3
XRCC6P12956 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.059e-7■□□□□ 10.3
XRCC6P12956 PNCK-224ENST00000472324 2143 ntTSL 1 (best)21.4■■□□□ 1.029e-7■□□□□ 10.3
XRCC6P12956 SRSF2-201ENST00000358156 572 ntTSL 420.91■□□□□ 0.949e-7■□□□□ 10.3
XRCC6P12956 PNCK-209ENST00000423545 448 ntTSL 420.73■□□□□ 0.919e-7■□□□□ 10.3
XRCC6P12956 PNCK-220ENST00000465303 868 ntTSL 420.66■□□□□ 0.99e-7■□□□□ 10.3
XRCC6P12956 PNCK-231ENST00000488994 1437 ntTSL 220.61■□□□□ 0.899e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.869e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.819e-7■□□□□ 10.3
XRCC6P12956 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.11■□□□□ 0.819e-7■□□□□ 10.3
XRCC6P12956 PNCK-207ENST00000419804 561 ntTSL 420.02■□□□□ 0.89e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-212ENST00000601449 1918 ntTSL 519.94■□□□□ 0.789e-7■□□□□ 10.3
XRCC6P12956 PNCK-219ENST00000463548 783 ntTSL 519.91■□□□□ 0.789e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-207ENST00000487330 631 ntTSL 219.71■□□□□ 0.759e-7■□□□□ 10.3
XRCC6P12956 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.749e-7■□□□□ 10.3
XRCC6P12956 SRSF2-207ENST00000583836 561 ntTSL 519.48■□□□□ 0.719e-7■□□□□ 10.3
XRCC6P12956 TRIB3-203ENST00000449710 1070 ntTSL 519.33■□□□□ 0.689e-7■□□□□ 10.3
XRCC6P12956 PNCK-230ENST00000488168 976 ntTSL 319.3■□□□□ 0.689e-7■□□□□ 10.3
XRCC6P12956 PNCK-206ENST00000418241 566 ntTSL 319.28■□□□□ 0.689e-7■□□□□ 10.3
XRCC6P12956 PNCK-212ENST00000434652 311 ntTSL 519.28■□□□□ 0.689e-7■□□□□ 10.3
XRCC6P12956 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.659e-7■□□□□ 10.3
XRCC6P12956 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.06■□□□□ 0.649e-7■□□□□ 10.3
XRCC6P12956 TATDN2-204ENST00000496355 1456 ntTSL 319.02■□□□□ 0.639e-7■□□□□ 10.3
XRCC6P12956 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.69■□□□□ 0.589e-7■□□□□ 10.3
XRCC6P12956 TCF3-208ENST00000586318 631 ntTSL 318.63■□□□□ 0.579e-7■□□□□ 10.3
XRCC6P12956 PNCK-222ENST00000466638 1204 ntTSL 218.4■□□□□ 0.549e-7■□□□□ 10.3
XRCC6P12956 PNCK-210ENST00000425526 725 ntTSL 517.91■□□□□ 0.469e-7■□□□□ 10.3
XRCC6P12956 SRSF2-204ENST00000452355 1357 ntTSL 517.81■□□□□ 0.449e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-211ENST00000601047 1127 ntTSL 517.81■□□□□ 0.449e-7■□□□□ 10.3
XRCC6P12956 LENG8-203ENST00000421200 594 ntTSL 317.3■□□□□ 0.369e-7■□□□□ 10.3
XRCC6P12956 SRSF2-208ENST00000585202 1359 ntTSL 316.94■□□□□ 0.39e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-208ENST00000600233 659 ntTSL 516.36■□□□□ 0.219e-7■□□□□ 10.3
XRCC6P12956 PNCK-214ENST00000439087 754 ntTSL 516.22■□□□□ 0.199e-7■□□□□ 10.3
XRCC6P12956 PNCK-232ENST00000489536 836 ntTSL 216.13■□□□□ 0.179e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-207ENST00000598985 900 ntTSL 515.84■□□□□ 0.139e-7■□□□□ 10.3
XRCC6P12956 PNCK-211ENST00000433470 717 ntTSL 515.71■□□□□ 0.119e-7■□□□□ 10.3
XRCC6P12956 STK11-203ENST00000585748 746 ntTSL 315.26■□□□□ 0.039e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC15.22■□□□□ 0.039e-7■□□□□ 10.3
XRCC6P12956 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.029e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-214ENST00000601813 593 ntTSL 514.52□□□□□ -0.099e-7■□□□□ 10.3
XRCC6P12956 HNRNPL-202ENST00000388749 1952 ntTSL 513.32□□□□□ -0.289e-7■□□□□ 10.3
XRCC6P12956 ZFAND5-201ENST00000237937 5310 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.359e-7■□□□□ 10.3
XRCC6P12956 AC022384.1-201ENST00000437082 2270 ntAPPRIS P5 TSL 212.5□□□□□ -0.419e-7■□□□□ 10.3
XRCC6P12956 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.489e-7■□□□□ 10.3
XRCC6P12956 PNCK-205ENST00000411968 557 ntTSL 511.46□□□□□ -0.579e-7■□□□□ 10.3
XRCC6P12956 HDLBP-217ENST00000430918 612 ntTSL 311.3□□□□□ -0.63e-6■□□□□ 10.3
XRCC6P12956 ADARB1-208ENST00000462214 587 ntTSL 39.11□□□□□ -0.958e-11■□□□□ 10.3
XRCC6P12956 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.985e-6■□□□□ 10.3
XRCC6P12956 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.595e-6■□□□□ 10.3
XRCC6P12956 SSB-204ENST00000417292 545 ntTSL 315.1■□□□□ 0.015e-6■□□□□ 10.3
XRCC6P12956 SSB-203ENST00000413002 674 ntTSL 314.62□□□□□ -0.075e-6■□□□□ 10.3
XRCC6P12956 SSB-205ENST00000422006 2463 ntTSL 511.13□□□□□ -0.635e-6■□□□□ 10.3
XRCC6P12956 SSB-208ENST00000468600 290 ntTSL 24.27□□□□□ -1.735e-6■□□□□ 10.3
XRCC6P12956 SLC25A37-211ENST00000523883 3651 ntTSL 212.6□□□□□ -0.395e-22■□□□□ 10.3
XRCC6P12956 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.463e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.253e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-206ENST00000417243 1047 ntTSL 514.03□□□□□ -0.163e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-217ENST00000473348 491 ntTSL 513.99□□□□□ -0.173e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-207ENST00000433382 578 ntTSL 513.81□□□□□ -0.23e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-223ENST00000497597 3401 ntTSL 213.64□□□□□ -0.233e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-205ENST00000416918 473 ntTSL 312.91□□□□□ -0.343e-7■□□□□ 10.3
XRCC6P12956 TRAPPC12-204ENST00000415624 815 ntAPPRIS ALT2 TSL 512.13□□□□□ -0.473e-7■□□□□ 10.3
Retrieved 100 of 6,788 protein–RNA pairs in 132.9 ms