RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
SSB-204ENST00000417292 ABCC9O60706 1549 aa32.4■■■□□ 2.78
SSB-204ENST00000417292 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
SSB-204ENST00000417292 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
SSB-204ENST00000417292 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
SSB-204ENST00000417292 NACADO15069 1562 aa30.24■■■□□ 2.43
SSB-204ENST00000417292 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
SSB-204ENST00000417292 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
SSB-204ENST00000417292 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
SSB-204ENST00000417292 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
SSB-204ENST00000417292 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
SSB-204ENST00000417292 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
SSB-204ENST00000417292 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
SSB-204ENST00000417292 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
SSB-204ENST00000417292 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
SSB-204ENST00000417292 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
SSB-204ENST00000417292 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
SSB-204ENST00000417292 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
SSB-204ENST00000417292 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
SSB-204ENST00000417292 CUX2O14529 1486 aa28.09■■■□□ 2.09
SSB-204ENST00000417292 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
SSB-204ENST00000417292 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
SSB-204ENST00000417292 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
SSB-204ENST00000417292 NESP48681 1621 aa27.71■■■□□ 2.03
SSB-204ENST00000417292 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
SSB-204ENST00000417292 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
SSB-204ENST00000417292 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
SSB-204ENST00000417292 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
SSB-204ENST00000417292 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
SSB-204ENST00000417292 BAZ1AQ9NRL2 1556 aaPredicted RBP27.4■■□□□ 1.98
SSB-204ENST00000417292 LAMC3Q9Y6N6 1575 aa27.38■■□□□ 1.97
SSB-204ENST00000417292 PEG3Q9GZU2 1588 aa27.37■■□□□ 1.97
SSB-204ENST00000417292 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
SSB-204ENST00000417292 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
SSB-204ENST00000417292 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
SSB-204ENST00000417292 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
SSB-204ENST00000417292 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
SSB-204ENST00000417292 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
SSB-204ENST00000417292 WDR62O43379 1518 aa27■■□□□ 1.91
SSB-204ENST00000417292 WIZO95785 1651 aa26.85■■□□□ 1.89
SSB-204ENST00000417292 CEP164Q9UPV0 1460 aa26.82■■□□□ 1.88
SSB-204ENST00000417292 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
SSB-204ENST00000417292 OSCARQ8IYS5 282 aa26.74■■□□□ 1.87
SSB-204ENST00000417292 CFTRP13569 1480 aa26.67■■□□□ 1.86
SSB-204ENST00000417292 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
SSB-204ENST00000417292 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
SSB-204ENST00000417292 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
SSB-204ENST00000417292 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
SSB-204ENST00000417292 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
SSB-204ENST00000417292 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
SSB-204ENST00000417292 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
SSB-204ENST00000417292 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
SSB-204ENST00000417292 IFT140Q96RY7 1462 aa26.31■■□□□ 1.8
SSB-204ENST00000417292 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
SSB-204ENST00000417292 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
SSB-204ENST00000417292 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
SSB-204ENST00000417292 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
SSB-204ENST00000417292 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
SSB-204ENST00000417292 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
SSB-204ENST00000417292 CHD1O14646 1710 aa26.05■■□□□ 1.76
SSB-204ENST00000417292 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.766e-9■■■■■ 32.8
SSB-204ENST00000417292 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
SSB-204ENST00000417292 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
SSB-204ENST00000417292 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
SSB-204ENST00000417292 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
SSB-204ENST00000417292 FBLN2P98095 1184 aa25.96■■□□□ 1.75
SSB-204ENST00000417292 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
SSB-204ENST00000417292 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
SSB-204ENST00000417292 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
SSB-204ENST00000417292 SOGA1O94964 1423 aa25.78■■□□□ 1.72
SSB-204ENST00000417292 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
SSB-204ENST00000417292 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
SSB-204ENST00000417292 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
SSB-204ENST00000417292 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
SSB-204ENST00000417292 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
SSB-204ENST00000417292 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
SSB-204ENST00000417292 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
SSB-204ENST00000417292 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
SSB-204ENST00000417292 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
SSB-204ENST00000417292 CUX1P39880 1505 aa25.59■■□□□ 1.69
SSB-204ENST00000417292 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
SSB-204ENST00000417292 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
SSB-204ENST00000417292 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
SSB-204ENST00000417292 ERCC6L2Q5T890 1561 aa25.36■■□□□ 1.65
SSB-204ENST00000417292 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
SSB-204ENST00000417292 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
SSB-204ENST00000417292 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
SSB-204ENST00000417292 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
SSB-204ENST00000417292 NUP160Q12769 1436 aa25.22■■□□□ 1.63
SSB-204ENST00000417292 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
SSB-204ENST00000417292 SHROOM2Q13796 1616 aa25.16■■□□□ 1.62
SSB-204ENST00000417292 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
SSB-204ENST00000417292 KIF13AQ9H1H9 1805 aa25.11■■□□□ 1.61
SSB-204ENST00000417292 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
SSB-204ENST00000417292 PRG4Q92954 1404 aaPredicted RBP25.02■■□□□ 1.6
SSB-204ENST00000417292 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
SSB-204ENST00000417292 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
SSB-204ENST00000417292 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
SSB-204ENST00000417292 JPH4Q96JJ6 628 aa24.96■■□□□ 1.59
SSB-204ENST00000417292 FAM69CQ0P6D2 419 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms