RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-208ENST00000586318 NISCHQ9Y2I1 1504 aa39.45■■■■□ 3.91
TCF3-208ENST00000586318 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
TCF3-208ENST00000586318 ABCC9O60706 1549 aa33.48■■■□□ 2.95
TCF3-208ENST00000586318 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
TCF3-208ENST00000586318 DCAF1Q9Y4B6 1507 aa32.7■■■□□ 2.83
TCF3-208ENST00000586318 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
TCF3-208ENST00000586318 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
TCF3-208ENST00000586318 NACADO15069 1562 aa32.62■■■□□ 2.81
TCF3-208ENST00000586318 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
TCF3-208ENST00000586318 SCRIBQ14160 1630 aa31.81■■■□□ 2.68
TCF3-208ENST00000586318 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
TCF3-208ENST00000586318 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
TCF3-208ENST00000586318 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
TCF3-208ENST00000586318 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
TCF3-208ENST00000586318 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
TCF3-208ENST00000586318 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
TCF3-208ENST00000586318 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
TCF3-208ENST00000586318 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
TCF3-208ENST00000586318 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
TCF3-208ENST00000586318 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
TCF3-208ENST00000586318 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
TCF3-208ENST00000586318 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.43
TCF3-208ENST00000586318 DNAJC5BQ9UF47 199 aa30.18■■■□□ 2.42
TCF3-208ENST00000586318 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
TCF3-208ENST00000586318 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
TCF3-208ENST00000586318 WIZO95785 1651 aa30.11■■■□□ 2.41
TCF3-208ENST00000586318 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
TCF3-208ENST00000586318 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
TCF3-208ENST00000586318 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
TCF3-208ENST00000586318 SUPT5HO00267 1087 aaKnown RBP29.91■■■□□ 2.38
TCF3-208ENST00000586318 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
TCF3-208ENST00000586318 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
TCF3-208ENST00000586318 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
TCF3-208ENST00000586318 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
TCF3-208ENST00000586318 CFTRP13569 1480 aa29.18■■■□□ 2.26
TCF3-208ENST00000586318 NESP48681 1621 aa29.15■■■□□ 2.26
TCF3-208ENST00000586318 PRDM2Q13029 1718 aa29.04■■■□□ 2.24
TCF3-208ENST00000586318 PDS5BQ9NTI5 1447 aa28.96■■■□□ 2.23
TCF3-208ENST00000586318 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
TCF3-208ENST00000586318 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
TCF3-208ENST00000586318 ERCC6Q03468 1493 aa28.82■■■□□ 2.2
TCF3-208ENST00000586318 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
TCF3-208ENST00000586318 MRC2Q9UBG0 1479 aa28.64■■■□□ 2.17
TCF3-208ENST00000586318 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
TCF3-208ENST00000586318 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
TCF3-208ENST00000586318 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
TCF3-208ENST00000586318 WDR62O43379 1518 aa28.53■■■□□ 2.16
TCF3-208ENST00000586318 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.161e-6■■■■■ 58.5
TCF3-208ENST00000586318 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
TCF3-208ENST00000586318 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
TCF3-208ENST00000586318 CUX1P39880 1505 aa28.49■■■□□ 2.15
TCF3-208ENST00000586318 SYNJ1O43426 1573 aa28.43■■■□□ 2.14
TCF3-208ENST00000586318 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
TCF3-208ENST00000586318 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
TCF3-208ENST00000586318 CUX2O14529 1486 aa28.34■■■□□ 2.13
TCF3-208ENST00000586318 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
TCF3-208ENST00000586318 POLA1P09884 1462 aaPredicted RBP28.29■■■□□ 2.12
TCF3-208ENST00000586318 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
TCF3-208ENST00000586318 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
TCF3-208ENST00000586318 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
TCF3-208ENST00000586318 SOGA1O94964 1423 aa28.18■■■□□ 2.1
TCF3-208ENST00000586318 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
TCF3-208ENST00000586318 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.1
TCF3-208ENST00000586318 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.08
TCF3-208ENST00000586318 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
TCF3-208ENST00000586318 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
TCF3-208ENST00000586318 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
TCF3-208ENST00000586318 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
TCF3-208ENST00000586318 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
TCF3-208ENST00000586318 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
TCF3-208ENST00000586318 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.052e-6■□□□□ 9.6
TCF3-208ENST00000586318 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
TCF3-208ENST00000586318 RUSC2Q8N2Y8 1516 aa27.8■■■□□ 2.04
TCF3-208ENST00000586318 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
TCF3-208ENST00000586318 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
TCF3-208ENST00000586318 EEA1Q15075 1411 aa27.76■■■□□ 2.04
TCF3-208ENST00000586318 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
TCF3-208ENST00000586318 IGF1RP08069 1367 aa27.7■■■□□ 2.02
TCF3-208ENST00000586318 SNAPC4Q5SXM2 1469 aa27.67■■■□□ 2.02
TCF3-208ENST00000586318 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
TCF3-208ENST00000586318 CUL7Q14999 1698 aa27.62■■■□□ 2.01
TCF3-208ENST00000586318 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
TCF3-208ENST00000586318 CSRNP3Q8WYN3 585 aa27.61■■■□□ 2.01
TCF3-208ENST00000586318 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
TCF3-208ENST00000586318 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
TCF3-208ENST00000586318 CARMIL1Q5VZK9 1371 aa27.55■■■□□ 2
TCF3-208ENST00000586318 SYNJ2O15056 1496 aa27.54■■■□□ 2
TCF3-208ENST00000586318 PRXQ9BXM0 1461 aa27.51■■■□□ 2
TCF3-208ENST00000586318 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
TCF3-208ENST00000586318 RAPGEF2Q9Y4G8 1499 aa27.45■■□□□ 1.99
TCF3-208ENST00000586318 CHD1O14646 1710 aa27.45■■□□□ 1.99
TCF3-208ENST00000586318 KIF21BO75037 1637 aa27.43■■□□□ 1.98
TCF3-208ENST00000586318 GRIN2AQ12879 1464 aa27.43■■□□□ 1.98
TCF3-208ENST00000586318 FBLN2P98095 1184 aa27.42■■□□□ 1.98
TCF3-208ENST00000586318 GOLGA3Q08378 1498 aa27.31■■□□□ 1.96
TCF3-208ENST00000586318 NUP160Q12769 1436 aa27.29■■□□□ 1.96
TCF3-208ENST00000586318 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
TCF3-208ENST00000586318 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
TCF3-208ENST00000586318 CTTNBP2Q8WZ74 1663 aa27.18■■□□□ 1.94
TCF3-208ENST00000586318 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 851.5 ms