RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.19
UBC-211ENST00000542416 ABCC9O60706 1549 aa20.48■□□□□ 0.87
UBC-211ENST00000542416 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
UBC-211ENST00000542416 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
UBC-211ENST00000542416 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
UBC-211ENST00000542416 NACADO15069 1562 aa19.27■□□□□ 0.67
UBC-211ENST00000542416 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
UBC-211ENST00000542416 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
UBC-211ENST00000542416 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
UBC-211ENST00000542416 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
UBC-211ENST00000542416 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
UBC-211ENST00000542416 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
UBC-211ENST00000542416 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
UBC-211ENST00000542416 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
UBC-211ENST00000542416 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
UBC-211ENST00000542416 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
UBC-211ENST00000542416 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
UBC-211ENST00000542416 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
UBC-211ENST00000542416 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
UBC-211ENST00000542416 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
UBC-211ENST00000542416 CUX2O14529 1486 aa17.82■□□□□ 0.44
UBC-211ENST00000542416 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
UBC-211ENST00000542416 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
UBC-211ENST00000542416 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
UBC-211ENST00000542416 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
UBC-211ENST00000542416 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
UBC-211ENST00000542416 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
UBC-211ENST00000542416 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
UBC-211ENST00000542416 NESP48681 1621 aa17.5■□□□□ 0.39
UBC-211ENST00000542416 PEG3Q9GZU2 1588 aa17.43■□□□□ 0.38
UBC-211ENST00000542416 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
UBC-211ENST00000542416 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
UBC-211ENST00000542416 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
UBC-211ENST00000542416 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
UBC-211ENST00000542416 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
UBC-211ENST00000542416 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
UBC-211ENST00000542416 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
UBC-211ENST00000542416 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
UBC-211ENST00000542416 WDR62O43379 1518 aa17.12■□□□□ 0.33
UBC-211ENST00000542416 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
UBC-211ENST00000542416 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
UBC-211ENST00000542416 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
UBC-211ENST00000542416 CFTRP13569 1480 aa17.02■□□□□ 0.32
UBC-211ENST00000542416 WIZO95785 1651 aa17.01■□□□□ 0.31
UBC-211ENST00000542416 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
UBC-211ENST00000542416 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
UBC-211ENST00000542416 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
UBC-211ENST00000542416 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
UBC-211ENST00000542416 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
UBC-211ENST00000542416 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
UBC-211ENST00000542416 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
UBC-211ENST00000542416 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
UBC-211ENST00000542416 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
UBC-211ENST00000542416 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
UBC-211ENST00000542416 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
UBC-211ENST00000542416 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
UBC-211ENST00000542416 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
UBC-211ENST00000542416 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
UBC-211ENST00000542416 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
UBC-211ENST00000542416 FBLN2P98095 1184 aa16.56■□□□□ 0.24
UBC-211ENST00000542416 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.242e-11■■■■■ 51
UBC-211ENST00000542416 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
UBC-211ENST00000542416 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
UBC-211ENST00000542416 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
UBC-211ENST00000542416 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
UBC-211ENST00000542416 SOGA1O94964 1423 aa16.47■□□□□ 0.23
UBC-211ENST00000542416 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
UBC-211ENST00000542416 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
UBC-211ENST00000542416 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
UBC-211ENST00000542416 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
UBC-211ENST00000542416 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
UBC-211ENST00000542416 CHD1O14646 1710 aa16.38■□□□□ 0.21
UBC-211ENST00000542416 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
UBC-211ENST00000542416 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
UBC-211ENST00000542416 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
UBC-211ENST00000542416 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
UBC-211ENST00000542416 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
UBC-211ENST00000542416 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
UBC-211ENST00000542416 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
UBC-211ENST00000542416 CUX1P39880 1505 aa16.27■□□□□ 0.2
UBC-211ENST00000542416 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
UBC-211ENST00000542416 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
UBC-211ENST00000542416 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
UBC-211ENST00000542416 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.179e-6■■■■■ 50.1
UBC-211ENST00000542416 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
UBC-211ENST00000542416 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.17
UBC-211ENST00000542416 NUP160Q12769 1436 aa16.08■□□□□ 0.16
UBC-211ENST00000542416 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
UBC-211ENST00000542416 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
UBC-211ENST00000542416 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
UBC-211ENST00000542416 ADAMTS12P58397 1594 aa16■□□□□ 0.15
UBC-211ENST00000542416 CEP170Q5SW79 1584 aa16■□□□□ 0.15
UBC-211ENST00000542416 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
UBC-211ENST00000542416 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
UBC-211ENST00000542416 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
UBC-211ENST00000542416 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
UBC-211ENST00000542416 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
UBC-211ENST00000542416 NPM1P06748 294 aaKnown RBP eCLIP15.95■□□□□ 0.14
UBC-211ENST00000542416 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
UBC-211ENST00000542416 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms