RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
ATXN2-215ENST00000542287 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
ATXN2-215ENST00000542287 ABCC9O60706 1549 aa11.43□□□□□ -0.58
ATXN2-215ENST00000542287 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
ATXN2-215ENST00000542287 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.6
ATXN2-215ENST00000542287 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
ATXN2-215ENST00000542287 NACADO15069 1562 aa11.26□□□□□ -0.61
ATXN2-215ENST00000542287 RB1CC1Q8TDY2 1594 aa11.22□□□□□ -0.61
ATXN2-215ENST00000542287 AEBP2Q6ZN18 517 aaPredicted RBP10.98□□□□□ -0.65
ATXN2-215ENST00000542287 UNC13AQ9UPW8 1703 aa10.96□□□□□ -0.65
ATXN2-215ENST00000542287 SHROOM4Q9ULL8 1493 aa10.9□□□□□ -0.66
ATXN2-215ENST00000542287 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
ATXN2-215ENST00000542287 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
ATXN2-215ENST00000542287 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
ATXN2-215ENST00000542287 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATXN2-215ENST00000542287 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
ATXN2-215ENST00000542287 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
ATXN2-215ENST00000542287 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
ATXN2-215ENST00000542287 CC2D2AQ9P2K1 1620 aa10.45□□□□□ -0.74
ATXN2-215ENST00000542287 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
ATXN2-215ENST00000542287 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
ATXN2-215ENST00000542287 CECR2Q9BXF3 1484 aa10.38□□□□□ -0.75
ATXN2-215ENST00000542287 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
ATXN2-215ENST00000542287 HMGXB3Q12766 1538 aa10.35□□□□□ -0.75
ATXN2-215ENST00000542287 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
ATXN2-215ENST00000542287 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
ATXN2-215ENST00000542287 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
ATXN2-215ENST00000542287 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
ATXN2-215ENST00000542287 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
ATXN2-215ENST00000542287 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
ATXN2-215ENST00000542287 WIZO95785 1651 aa10.22□□□□□ -0.77
ATXN2-215ENST00000542287 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
ATXN2-215ENST00000542287 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
ATXN2-215ENST00000542287 LAMC3Q9Y6N6 1575 aa10.08□□□□□ -0.8
ATXN2-215ENST00000542287 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
ATXN2-215ENST00000542287 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
ATXN2-215ENST00000542287 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
ATXN2-215ENST00000542287 CFTRP13569 1480 aa9.99□□□□□ -0.81
ATXN2-215ENST00000542287 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
ATXN2-215ENST00000542287 NESP48681 1621 aa9.93□□□□□ -0.82
ATXN2-215ENST00000542287 KIF21AQ7Z4S6 1674 aa9.92□□□□□ -0.82
ATXN2-215ENST00000542287 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
ATXN2-215ENST00000542287 ERCC6Q03468 1493 aa9.88□□□□□ -0.83
ATXN2-215ENST00000542287 CUX2O14529 1486 aa9.87□□□□□ -0.83
ATXN2-215ENST00000542287 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
ATXN2-215ENST00000542287 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
ATXN2-215ENST00000542287 WDR62O43379 1518 aa9.86□□□□□ -0.83
ATXN2-215ENST00000542287 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
ATXN2-215ENST00000542287 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
ATXN2-215ENST00000542287 DNMBPQ6XZF7 1577 aa9.79□□□□□ -0.84
ATXN2-215ENST00000542287 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.84
ATXN2-215ENST00000542287 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
ATXN2-215ENST00000542287 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
ATXN2-215ENST00000542287 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
ATXN2-215ENST00000542287 TOP2BQ02880 1626 aa9.7□□□□□ -0.86
ATXN2-215ENST00000542287 CUX1P39880 1505 aa9.7□□□□□ -0.86
ATXN2-215ENST00000542287 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
ATXN2-215ENST00000542287 TARBP1Q13395 1621 aaKnown RBP9.67□□□□□ -0.86
ATXN2-215ENST00000542287 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.86
ATXN2-215ENST00000542287 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
ATXN2-215ENST00000542287 SYNJ1O43426 1573 aa9.64□□□□□ -0.87
ATXN2-215ENST00000542287 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
ATXN2-215ENST00000542287 PHF23Q9BUL5 403 aaPredicted RBP9.63□□□□□ -0.87
ATXN2-215ENST00000542287 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
ATXN2-215ENST00000542287 EIF4G3O43432 1585 aaKnown RBP9.59□□□□□ -0.87
ATXN2-215ENST00000542287 ABCA5Q8WWZ7 1642 aa9.59□□□□□ -0.87
ATXN2-215ENST00000542287 SOGA1O94964 1423 aa9.58□□□□□ -0.88
ATXN2-215ENST00000542287 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
ATXN2-215ENST00000542287 PBRM1Q86U86 1689 aa9.56□□□□□ -0.88
ATXN2-215ENST00000542287 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
ATXN2-215ENST00000542287 ZNF608Q9ULD9 1512 aaPredicted RBP9.53□□□□□ -0.88
ATXN2-215ENST00000542287 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
ATXN2-215ENST00000542287 ERICH3Q5RHP9 1530 aa9.51□□□□□ -0.89
ATXN2-215ENST00000542287 MAGI1Q96QZ7 1491 aaPredicted RBP9.51□□□□□ -0.89
ATXN2-215ENST00000542287 GAPVD1Q14C86 1478 aa9.5□□□□□ -0.89
ATXN2-215ENST00000542287 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
ATXN2-215ENST00000542287 CUL7Q14999 1698 aa9.48□□□□□ -0.89
ATXN2-215ENST00000542287 ADAMTS12P58397 1594 aa9.47□□□□□ -0.89
ATXN2-215ENST00000542287 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■■ 28.2
ATXN2-215ENST00000542287 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
ATXN2-215ENST00000542287 CHD1O14646 1710 aa9.45□□□□□ -0.9
ATXN2-215ENST00000542287 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
ATXN2-215ENST00000542287 SNAPC4Q5SXM2 1469 aa9.44□□□□□ -0.9
ATXN2-215ENST00000542287 TDRD9Q8NDG6 1382 aaKnown RBP9.44□□□□□ -0.9
ATXN2-215ENST00000542287 FAM9AQ8IZU1 332 aaPredicted RBP9.44□□□□□ -0.9
ATXN2-215ENST00000542287 FHAD1B1AJZ9 1412 aa9.42□□□□□ -0.9
ATXN2-215ENST00000542287 EEA1Q15075 1411 aa9.42□□□□□ -0.9
ATXN2-215ENST00000542287 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
ATXN2-215ENST00000542287 CLASP1Q7Z460 1538 aa9.39□□□□□ -0.91
ATXN2-215ENST00000542287 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
ATXN2-215ENST00000542287 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
ATXN2-215ENST00000542287 GRIN2AQ12879 1464 aa9.38□□□□□ -0.91
ATXN2-215ENST00000542287 IGF1RP08069 1367 aa9.38□□□□□ -0.91
ATXN2-215ENST00000542287 NUP160Q12769 1436 aa9.36□□□□□ -0.91
ATXN2-215ENST00000542287 SHROOM2Q13796 1616 aa9.34□□□□□ -0.91
ATXN2-215ENST00000542287 CEP170Q5SW79 1584 aa9.34□□□□□ -0.91
ATXN2-215ENST00000542287 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
ATXN2-215ENST00000542287 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
ATXN2-215ENST00000542287 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
ATXN2-215ENST00000542287 KIF21BO75037 1637 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms