RNA–Protein interactions for RNA: ENST00000535949.5

ATXN2-214, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-214ENST00000535949 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
ATXN2-214ENST00000535949 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
ATXN2-214ENST00000535949 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
ATXN2-214ENST00000535949 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
ATXN2-214ENST00000535949 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
ATXN2-214ENST00000535949 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
ATXN2-214ENST00000535949 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
ATXN2-214ENST00000535949 NACADO15069 1562 aa13.69□□□□□ -0.22
ATXN2-214ENST00000535949 ABCC9O60706 1549 aa13.55□□□□□ -0.24
ATXN2-214ENST00000535949 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
ATXN2-214ENST00000535949 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
ATXN2-214ENST00000535949 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
ATXN2-214ENST00000535949 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
ATXN2-214ENST00000535949 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.29
ATXN2-214ENST00000535949 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
ATXN2-214ENST00000535949 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
ATXN2-214ENST00000535949 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
ATXN2-214ENST00000535949 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
ATXN2-214ENST00000535949 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
ATXN2-214ENST00000535949 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
ATXN2-214ENST00000535949 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
ATXN2-214ENST00000535949 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
ATXN2-214ENST00000535949 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
ATXN2-214ENST00000535949 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
ATXN2-214ENST00000535949 WIZO95785 1651 aa12.65□□□□□ -0.38
ATXN2-214ENST00000535949 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
ATXN2-214ENST00000535949 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
ATXN2-214ENST00000535949 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATXN2-214ENST00000535949 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
ATXN2-214ENST00000535949 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
ATXN2-214ENST00000535949 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
ATXN2-214ENST00000535949 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
ATXN2-214ENST00000535949 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
ATXN2-214ENST00000535949 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
ATXN2-214ENST00000535949 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
ATXN2-214ENST00000535949 CFTRP13569 1480 aa12.22□□□□□ -0.45
ATXN2-214ENST00000535949 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
ATXN2-214ENST00000535949 BIVM-ERCC5R4GMW8 1640 aa12.16□□□□□ -0.46
ATXN2-214ENST00000535949 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
ATXN2-214ENST00000535949 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
ATXN2-214ENST00000535949 WRNQ14191 1432 aaPredicted RBP eCLIP12.08□□□□□ -0.48
ATXN2-214ENST00000535949 EEA1Q15075 1411 aa12.08□□□□□ -0.48
ATXN2-214ENST00000535949 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
ATXN2-214ENST00000535949 SYNJ1O43426 1573 aa12.03□□□□□ -0.48
ATXN2-214ENST00000535949 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
ATXN2-214ENST00000535949 TRIM41Q8WV44 630 aa12□□□□□ -0.49
ATXN2-214ENST00000535949 DNMBPQ6XZF7 1577 aa12□□□□□ -0.49
ATXN2-214ENST00000535949 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
ATXN2-214ENST00000535949 CUX1P39880 1505 aa11.97□□□□□ -0.49
ATXN2-214ENST00000535949 CEP164Q9UPV0 1460 aa11.97□□□□□ -0.49
ATXN2-214ENST00000535949 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
ATXN2-214ENST00000535949 KIF21AQ7Z4S6 1674 aa11.92□□□□□ -0.5
ATXN2-214ENST00000535949 KIF21BO75037 1637 aa11.9□□□□□ -0.5
ATXN2-214ENST00000535949 TOPBP1Q92547 1522 aa11.88□□□□□ -0.51
ATXN2-214ENST00000535949 NESP48681 1621 aa11.87□□□□□ -0.51
ATXN2-214ENST00000535949 MRC2Q9UBG0 1479 aa11.87□□□□□ -0.51
ATXN2-214ENST00000535949 WDR62O43379 1518 aa11.86□□□□□ -0.51
ATXN2-214ENST00000535949 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
ATXN2-214ENST00000535949 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
ATXN2-214ENST00000535949 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
ATXN2-214ENST00000535949 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
ATXN2-214ENST00000535949 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
ATXN2-214ENST00000535949 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
ATXN2-214ENST00000535949 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
ATXN2-214ENST00000535949 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
ATXN2-214ENST00000535949 CUL7Q14999 1698 aa11.79□□□□□ -0.52
ATXN2-214ENST00000535949 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
ATXN2-214ENST00000535949 GOLGA3Q08378 1498 aa11.78□□□□□ -0.52
ATXN2-214ENST00000535949 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
ATXN2-214ENST00000535949 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
ATXN2-214ENST00000535949 SOGA1O94964 1423 aa11.76□□□□□ -0.53
ATXN2-214ENST00000535949 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
ATXN2-214ENST00000535949 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
ATXN2-214ENST00000535949 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
ATXN2-214ENST00000535949 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
ATXN2-214ENST00000535949 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
ATXN2-214ENST00000535949 CUX2O14529 1486 aa11.71□□□□□ -0.54
ATXN2-214ENST00000535949 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
ATXN2-214ENST00000535949 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
ATXN2-214ENST00000535949 RAPGEF2Q9Y4G8 1499 aa11.64□□□□□ -0.55
ATXN2-214ENST00000535949 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
ATXN2-214ENST00000535949 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
ATXN2-214ENST00000535949 CTTNBP2Q8WZ74 1663 aa11.62□□□□□ -0.55
ATXN2-214ENST00000535949 IGF1RP08069 1367 aa11.62□□□□□ -0.55
ATXN2-214ENST00000535949 ADAMTS12P58397 1594 aa11.61□□□□□ -0.55
ATXN2-214ENST00000535949 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
ATXN2-214ENST00000535949 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
ATXN2-214ENST00000535949 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
ATXN2-214ENST00000535949 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
ATXN2-214ENST00000535949 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
ATXN2-214ENST00000535949 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
ATXN2-214ENST00000535949 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
ATXN2-214ENST00000535949 FAM9AQ8IZU1 332 aaPredicted RBP11.54□□□□□ -0.56
ATXN2-214ENST00000535949 LOC105371045A0A1W2PR82 267 aa11.52□□□□□ -0.57
ATXN2-214ENST00000535949 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
ATXN2-214ENST00000535949 CLIP1P30622 1438 aa11.49□□□□□ -0.57
ATXN2-214ENST00000535949 SAMD9Q5K651 1589 aa11.47□□□□□ -0.57
ATXN2-214ENST00000535949 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
ATXN2-214ENST00000535949 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
ATXN2-214ENST00000535949 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms