RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 NISCHQ9Y2I1 1504 aa36.56■■■■□ 3.44
ATXN2-218ENST00000549455 ABCC9O60706 1549 aa33■■■□□ 2.87
ATXN2-218ENST00000549455 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
ATXN2-218ENST00000549455 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
ATXN2-218ENST00000549455 NACADO15069 1562 aa31.09■■■□□ 2.57
ATXN2-218ENST00000549455 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
ATXN2-218ENST00000549455 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
ATXN2-218ENST00000549455 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
ATXN2-218ENST00000549455 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
ATXN2-218ENST00000549455 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
ATXN2-218ENST00000549455 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
ATXN2-218ENST00000549455 ZCCHC6Q5VYS8 1495 aaKnown RBP30.3■■■□□ 2.44
ATXN2-218ENST00000549455 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
ATXN2-218ENST00000549455 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
ATXN2-218ENST00000549455 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
ATXN2-218ENST00000549455 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
ATXN2-218ENST00000549455 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
ATXN2-218ENST00000549455 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
ATXN2-218ENST00000549455 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
ATXN2-218ENST00000549455 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
ATXN2-218ENST00000549455 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
ATXN2-218ENST00000549455 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
ATXN2-218ENST00000549455 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
ATXN2-218ENST00000549455 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
ATXN2-218ENST00000549455 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
ATXN2-218ENST00000549455 CUX2O14529 1486 aa28.45■■■□□ 2.14
ATXN2-218ENST00000549455 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
ATXN2-218ENST00000549455 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
ATXN2-218ENST00000549455 NESP48681 1621 aa28.31■■■□□ 2.12
ATXN2-218ENST00000549455 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
ATXN2-218ENST00000549455 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
ATXN2-218ENST00000549455 LAMC3Q9Y6N6 1575 aa28.1■■■□□ 2.09
ATXN2-218ENST00000549455 THOC2Q8NI27 1593 aaKnown RBP28.08■■■□□ 2.09
ATXN2-218ENST00000549455 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
ATXN2-218ENST00000549455 WIZO95785 1651 aa27.91■■■□□ 2.06
ATXN2-218ENST00000549455 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
ATXN2-218ENST00000549455 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
ATXN2-218ENST00000549455 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
ATXN2-218ENST00000549455 WDR62O43379 1518 aa27.64■■■□□ 2.02
ATXN2-218ENST00000549455 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
ATXN2-218ENST00000549455 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
ATXN2-218ENST00000549455 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
ATXN2-218ENST00000549455 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
ATXN2-218ENST00000549455 CFTRP13569 1480 aa27.46■■□□□ 1.99
ATXN2-218ENST00000549455 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
ATXN2-218ENST00000549455 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
ATXN2-218ENST00000549455 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
ATXN2-218ENST00000549455 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
ATXN2-218ENST00000549455 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
ATXN2-218ENST00000549455 IFT140Q96RY7 1462 aa27■■□□□ 1.91
ATXN2-218ENST00000549455 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
ATXN2-218ENST00000549455 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
ATXN2-218ENST00000549455 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
ATXN2-218ENST00000549455 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
ATXN2-218ENST00000549455 ABCC8Q09428 1581 aa26.89■■□□□ 1.9
ATXN2-218ENST00000549455 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
ATXN2-218ENST00000549455 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
ATXN2-218ENST00000549455 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
ATXN2-218ENST00000549455 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
ATXN2-218ENST00000549455 CHD1O14646 1710 aa26.76■■□□□ 1.87
ATXN2-218ENST00000549455 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
ATXN2-218ENST00000549455 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.873e-7■■■■■ 29.7
ATXN2-218ENST00000549455 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
ATXN2-218ENST00000549455 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
ATXN2-218ENST00000549455 FBLN2P98095 1184 aa26.58■■□□□ 1.85
ATXN2-218ENST00000549455 SOGA1O94964 1423 aa26.56■■□□□ 1.84
ATXN2-218ENST00000549455 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
ATXN2-218ENST00000549455 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
ATXN2-218ENST00000549455 CUX1P39880 1505 aa26.49■■□□□ 1.83
ATXN2-218ENST00000549455 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
ATXN2-218ENST00000549455 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
ATXN2-218ENST00000549455 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
ATXN2-218ENST00000549455 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
ATXN2-218ENST00000549455 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
ATXN2-218ENST00000549455 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
ATXN2-218ENST00000549455 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
ATXN2-218ENST00000549455 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
ATXN2-218ENST00000549455 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
ATXN2-218ENST00000549455 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.81
ATXN2-218ENST00000549455 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
ATXN2-218ENST00000549455 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
ATXN2-218ENST00000549455 TRHP20396 242 aaPredicted RBP26.26■■□□□ 1.79
ATXN2-218ENST00000549455 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
ATXN2-218ENST00000549455 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
ATXN2-218ENST00000549455 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
ATXN2-218ENST00000549455 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
ATXN2-218ENST00000549455 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
ATXN2-218ENST00000549455 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
ATXN2-218ENST00000549455 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
ATXN2-218ENST00000549455 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
ATXN2-218ENST00000549455 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
ATXN2-218ENST00000549455 ERCC6L2Q5T890 1561 aa25.96■■□□□ 1.75
ATXN2-218ENST00000549455 NUP160Q12769 1436 aa25.91■■□□□ 1.74
ATXN2-218ENST00000549455 FHAD1B1AJZ9 1412 aa25.9■■□□□ 1.74
ATXN2-218ENST00000549455 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
ATXN2-218ENST00000549455 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
ATXN2-218ENST00000549455 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
ATXN2-218ENST00000549455 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
ATXN2-218ENST00000549455 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
ATXN2-218ENST00000549455 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms