RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
UBC-213ENST00000546120 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
UBC-213ENST00000546120 HRCP23327 699 aa17.05■□□□□ 0.32
UBC-213ENST00000546120 MYT1Q01538 1121 aa16.95■□□□□ 0.3
UBC-213ENST00000546120 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
UBC-213ENST00000546120 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
UBC-213ENST00000546120 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
UBC-213ENST00000546120 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
UBC-213ENST00000546120 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
UBC-213ENST00000546120 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
UBC-213ENST00000546120 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
UBC-213ENST00000546120 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
UBC-213ENST00000546120 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
UBC-213ENST00000546120 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
UBC-213ENST00000546120 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
UBC-213ENST00000546120 ABCC9O60706 1549 aa16■□□□□ 0.15
UBC-213ENST00000546120 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
UBC-213ENST00000546120 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
UBC-213ENST00000546120 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
UBC-213ENST00000546120 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
UBC-213ENST00000546120 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
UBC-213ENST00000546120 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
UBC-213ENST00000546120 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
UBC-213ENST00000546120 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
UBC-213ENST00000546120 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
UBC-213ENST00000546120 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
UBC-213ENST00000546120 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
UBC-213ENST00000546120 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
UBC-213ENST00000546120 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
UBC-213ENST00000546120 NACADO15069 1562 aa15.22■□□□□ 0.03
UBC-213ENST00000546120 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
UBC-213ENST00000546120 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.029e-6■■■■■ 50.1
UBC-213ENST00000546120 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
UBC-213ENST00000546120 ANP32EQ9BTT0 268 aa15.03■□□□□ -0
UBC-213ENST00000546120 UNC13AQ9UPW8 1703 aa15.03■□□□□ -0
UBC-213ENST00000546120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
UBC-213ENST00000546120 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBC-213ENST00000546120 EEA1Q15075 1411 aa14.92□□□□□ -0.02
UBC-213ENST00000546120 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
UBC-213ENST00000546120 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
UBC-213ENST00000546120 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
UBC-213ENST00000546120 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
UBC-213ENST00000546120 BICRAQ9NZM4 1560 aa14.84□□□□□ -0.03
UBC-213ENST00000546120 MIER1Q8N108 512 aa14.79□□□□□ -0.04
UBC-213ENST00000546120 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
UBC-213ENST00000546120 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
UBC-213ENST00000546120 SCRIBQ14160 1630 aa14.77□□□□□ -0.05
UBC-213ENST00000546120 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
UBC-213ENST00000546120 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
UBC-213ENST00000546120 CEP162Q5TB80 1403 aa14.71□□□□□ -0.05
UBC-213ENST00000546120 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
UBC-213ENST00000546120 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
UBC-213ENST00000546120 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.08
UBC-213ENST00000546120 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
UBC-213ENST00000546120 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
UBC-213ENST00000546120 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
UBC-213ENST00000546120 NEFLP07196 543 aa14.53□□□□□ -0.08
UBC-213ENST00000546120 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
UBC-213ENST00000546120 ERICH6BQ5W0A0 696 aa14.51□□□□□ -0.09
UBC-213ENST00000546120 APLP2Q06481 763 aa14.49□□□□□ -0.09
UBC-213ENST00000546120 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
UBC-213ENST00000546120 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
UBC-213ENST00000546120 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
UBC-213ENST00000546120 TIMELESSQ9UNS1 1208 aa14.46□□□□□ -0.09
UBC-213ENST00000546120 VPS8Q8N3P4 1428 aa14.44□□□□□ -0.1
UBC-213ENST00000546120 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
UBC-213ENST00000546120 RBM19Q9Y4C8 960 aaKnown RBP14.42□□□□□ -0.1
UBC-213ENST00000546120 KIF21BO75037 1637 aa14.41□□□□□ -0.1
UBC-213ENST00000546120 CCER2I3L3R5 266 aa14.41□□□□□ -0.1
UBC-213ENST00000546120 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
UBC-213ENST00000546120 CUX2O14529 1486 aa14.4□□□□□ -0.1
UBC-213ENST00000546120 UBTFP17480 764 aaKnown RBP14.39□□□□□ -0.11
UBC-213ENST00000546120 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
UBC-213ENST00000546120 DHX57Q6P158 1386 aaKnown RBP14.36□□□□□ -0.11
UBC-213ENST00000546120 CLIP1P30622 1438 aa14.34□□□□□ -0.11
UBC-213ENST00000546120 CCDC88BA6NC98 1476 aa14.34□□□□□ -0.11
UBC-213ENST00000546120 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
UBC-213ENST00000546120 WIZO95785 1651 aa14.3□□□□□ -0.12
UBC-213ENST00000546120 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
UBC-213ENST00000546120 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
UBC-213ENST00000546120 FKBP8Q14318 412 aa14.29□□□□□ -0.12
UBC-213ENST00000546120 SOGA1O94964 1423 aa14.27□□□□□ -0.12
UBC-213ENST00000546120 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
UBC-213ENST00000546120 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
UBC-213ENST00000546120 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
UBC-213ENST00000546120 ABCC8Q09428 1581 aa14.21□□□□□ -0.14
UBC-213ENST00000546120 ANP32CO43423 234 aa14.17□□□□□ -0.14
UBC-213ENST00000546120 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
UBC-213ENST00000546120 MAP3K1Q13233 1512 aa14.13□□□□□ -0.15
UBC-213ENST00000546120 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
UBC-213ENST00000546120 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
UBC-213ENST00000546120 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
UBC-213ENST00000546120 DEKP35659 375 aaKnown RBP14.09□□□□□ -0.15
UBC-213ENST00000546120 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
UBC-213ENST00000546120 MSH5O43196 834 aa14.08□□□□□ -0.16
UBC-213ENST00000546120 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
UBC-213ENST00000546120 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
UBC-213ENST00000546120 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
UBC-213ENST00000546120 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
UBC-213ENST00000546120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.02□□□□□ -0.171e-15■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms