RNA–Protein interactions for RNA: ENST00000389153.8

ATXN2-202, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 3,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-202ENST00000389153 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.19
ATXN2-202ENST00000389153 ABCC9O60706 1549 aa15.19■□□□□ 0.02
ATXN2-202ENST00000389153 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
ATXN2-202ENST00000389153 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
ATXN2-202ENST00000389153 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
ATXN2-202ENST00000389153 NACADO15069 1562 aa14.3□□□□□ -0.12
ATXN2-202ENST00000389153 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
ATXN2-202ENST00000389153 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
ATXN2-202ENST00000389153 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
ATXN2-202ENST00000389153 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
ATXN2-202ENST00000389153 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
ATXN2-202ENST00000389153 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATXN2-202ENST00000389153 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
ATXN2-202ENST00000389153 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
ATXN2-202ENST00000389153 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
ATXN2-202ENST00000389153 CUX2O14529 1486 aa13.62□□□□□ -0.23
ATXN2-202ENST00000389153 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
ATXN2-202ENST00000389153 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
ATXN2-202ENST00000389153 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
ATXN2-202ENST00000389153 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
ATXN2-202ENST00000389153 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
ATXN2-202ENST00000389153 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
ATXN2-202ENST00000389153 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
ATXN2-202ENST00000389153 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
ATXN2-202ENST00000389153 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
ATXN2-202ENST00000389153 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
ATXN2-202ENST00000389153 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
ATXN2-202ENST00000389153 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
ATXN2-202ENST00000389153 NESP48681 1621 aa12.89□□□□□ -0.35
ATXN2-202ENST00000389153 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
ATXN2-202ENST00000389153 PEG3Q9GZU2 1588 aa12.87□□□□□ -0.35
ATXN2-202ENST00000389153 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
ATXN2-202ENST00000389153 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
ATXN2-202ENST00000389153 WDR62O43379 1518 aa12.83□□□□□ -0.36
ATXN2-202ENST00000389153 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
ATXN2-202ENST00000389153 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
ATXN2-202ENST00000389153 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
ATXN2-202ENST00000389153 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
ATXN2-202ENST00000389153 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
ATXN2-202ENST00000389153 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
ATXN2-202ENST00000389153 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
ATXN2-202ENST00000389153 CADPSQ9ULU8 1353 aa12.6□□□□□ -0.39
ATXN2-202ENST00000389153 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
ATXN2-202ENST00000389153 ARHGEF11O15085 1522 aa12.55□□□□□ -0.4
ATXN2-202ENST00000389153 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
ATXN2-202ENST00000389153 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
ATXN2-202ENST00000389153 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
ATXN2-202ENST00000389153 URB2Q14146 1524 aaKnown RBP12.41□□□□□ -0.42
ATXN2-202ENST00000389153 CFTRP13569 1480 aa12.41□□□□□ -0.42
ATXN2-202ENST00000389153 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
ATXN2-202ENST00000389153 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
ATXN2-202ENST00000389153 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
ATXN2-202ENST00000389153 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
ATXN2-202ENST00000389153 CHD1O14646 1710 aa12.33□□□□□ -0.44
ATXN2-202ENST00000389153 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
ATXN2-202ENST00000389153 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
ATXN2-202ENST00000389153 WIZO95785 1651 aa12.26□□□□□ -0.45
ATXN2-202ENST00000389153 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
ATXN2-202ENST00000389153 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
ATXN2-202ENST00000389153 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
ATXN2-202ENST00000389153 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
ATXN2-202ENST00000389153 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.45
ATXN2-202ENST00000389153 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
ATXN2-202ENST00000389153 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
ATXN2-202ENST00000389153 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
ATXN2-202ENST00000389153 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
ATXN2-202ENST00000389153 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
ATXN2-202ENST00000389153 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
ATXN2-202ENST00000389153 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.481e-6■■■■■ 28.2
ATXN2-202ENST00000389153 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.48
ATXN2-202ENST00000389153 POLA1P09884 1462 aaPredicted RBP12□□□□□ -0.49
ATXN2-202ENST00000389153 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
ATXN2-202ENST00000389153 SNAPC4Q5SXM2 1469 aa11.98□□□□□ -0.49
ATXN2-202ENST00000389153 SYNJ2O15056 1496 aa11.97□□□□□ -0.49
ATXN2-202ENST00000389153 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
ATXN2-202ENST00000389153 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
ATXN2-202ENST00000389153 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
ATXN2-202ENST00000389153 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
ATXN2-202ENST00000389153 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
ATXN2-202ENST00000389153 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
ATXN2-202ENST00000389153 SOGA1O94964 1423 aa11.87□□□□□ -0.51
ATXN2-202ENST00000389153 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
ATXN2-202ENST00000389153 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
ATXN2-202ENST00000389153 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
ATXN2-202ENST00000389153 FBLN2P98095 1184 aa11.84□□□□□ -0.51
ATXN2-202ENST00000389153 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
ATXN2-202ENST00000389153 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
ATXN2-202ENST00000389153 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
ATXN2-202ENST00000389153 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
ATXN2-202ENST00000389153 NUP160Q12769 1436 aa11.81□□□□□ -0.52
ATXN2-202ENST00000389153 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
ATXN2-202ENST00000389153 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
ATXN2-202ENST00000389153 KDM6BO15054 1643 aa11.8□□□□□ -0.52
ATXN2-202ENST00000389153 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
ATXN2-202ENST00000389153 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
ATXN2-202ENST00000389153 GRIN2AQ12879 1464 aa11.77□□□□□ -0.53
ATXN2-202ENST00000389153 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
ATXN2-202ENST00000389153 CUX1P39880 1505 aa11.75□□□□□ -0.53
ATXN2-202ENST00000389153 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.54
ATXN2-202ENST00000389153 ADCY10Q96PN6 1610 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms