RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
SSB-203ENST00000413002 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
SSB-203ENST00000413002 ABCC9O60706 1549 aa28.02■■■□□ 2.08
SSB-203ENST00000413002 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
SSB-203ENST00000413002 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
SSB-203ENST00000413002 NACADO15069 1562 aa26.69■■□□□ 1.86
SSB-203ENST00000413002 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
SSB-203ENST00000413002 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
SSB-203ENST00000413002 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
SSB-203ENST00000413002 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
SSB-203ENST00000413002 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
SSB-203ENST00000413002 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
SSB-203ENST00000413002 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
SSB-203ENST00000413002 SCRIBQ14160 1630 aa26■■□□□ 1.75
SSB-203ENST00000413002 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
SSB-203ENST00000413002 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
SSB-203ENST00000413002 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
SSB-203ENST00000413002 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
SSB-203ENST00000413002 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
SSB-203ENST00000413002 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
SSB-203ENST00000413002 SMARCA4P51532 1647 aa24.79■■□□□ 1.56
SSB-203ENST00000413002 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
SSB-203ENST00000413002 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
SSB-203ENST00000413002 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
SSB-203ENST00000413002 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
SSB-203ENST00000413002 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
SSB-203ENST00000413002 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
SSB-203ENST00000413002 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
SSB-203ENST00000413002 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
SSB-203ENST00000413002 WIZO95785 1651 aa24.4■■□□□ 1.5
SSB-203ENST00000413002 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
SSB-203ENST00000413002 NESP48681 1621 aa24.23■■□□□ 1.47
SSB-203ENST00000413002 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
SSB-203ENST00000413002 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
SSB-203ENST00000413002 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
SSB-203ENST00000413002 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
SSB-203ENST00000413002 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
SSB-203ENST00000413002 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
SSB-203ENST00000413002 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
SSB-203ENST00000413002 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
SSB-203ENST00000413002 CFTRP13569 1480 aa23.81■■□□□ 1.4
SSB-203ENST00000413002 CUX2O14529 1486 aa23.79■■□□□ 1.4
SSB-203ENST00000413002 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
SSB-203ENST00000413002 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
SSB-203ENST00000413002 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
SSB-203ENST00000413002 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
SSB-203ENST00000413002 WDR62O43379 1518 aa23.55■■□□□ 1.36
SSB-203ENST00000413002 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
SSB-203ENST00000413002 PRDM2Q13029 1718 aa23.49■■□□□ 1.35
SSB-203ENST00000413002 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
SSB-203ENST00000413002 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
SSB-203ENST00000413002 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
SSB-203ENST00000413002 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
SSB-203ENST00000413002 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
SSB-203ENST00000413002 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
SSB-203ENST00000413002 CUX1P39880 1505 aa23.14■■□□□ 1.3
SSB-203ENST00000413002 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
SSB-203ENST00000413002 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
SSB-203ENST00000413002 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
SSB-203ENST00000413002 SOGA1O94964 1423 aa23.07■■□□□ 1.28
SSB-203ENST00000413002 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
SSB-203ENST00000413002 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.286e-9■■■■■ 32.8
SSB-203ENST00000413002 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
SSB-203ENST00000413002 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
SSB-203ENST00000413002 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
SSB-203ENST00000413002 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
SSB-203ENST00000413002 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
SSB-203ENST00000413002 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
SSB-203ENST00000413002 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
SSB-203ENST00000413002 FBLN2P98095 1184 aa22.85■■□□□ 1.25
SSB-203ENST00000413002 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
SSB-203ENST00000413002 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
SSB-203ENST00000413002 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
SSB-203ENST00000413002 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
SSB-203ENST00000413002 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
SSB-203ENST00000413002 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
SSB-203ENST00000413002 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
SSB-203ENST00000413002 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
SSB-203ENST00000413002 CHD1O14646 1710 aa22.7■■□□□ 1.22
SSB-203ENST00000413002 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
SSB-203ENST00000413002 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
SSB-203ENST00000413002 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
SSB-203ENST00000413002 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
SSB-203ENST00000413002 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
SSB-203ENST00000413002 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
SSB-203ENST00000413002 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
SSB-203ENST00000413002 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
SSB-203ENST00000413002 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
SSB-203ENST00000413002 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
SSB-203ENST00000413002 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
SSB-203ENST00000413002 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
SSB-203ENST00000413002 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
SSB-203ENST00000413002 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
SSB-203ENST00000413002 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
SSB-203ENST00000413002 IGF1RP08069 1367 aa22.44■■□□□ 1.18
SSB-203ENST00000413002 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
SSB-203ENST00000413002 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
SSB-203ENST00000413002 NUP160Q12769 1436 aa22.36■■□□□ 1.17
SSB-203ENST00000413002 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
SSB-203ENST00000413002 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms