RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 NISCHQ9Y2I1 1504 aa20.87■□□□□ 0.93
ATXN2-226ENST00000608853 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
ATXN2-226ENST00000608853 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
ATXN2-226ENST00000608853 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
ATXN2-226ENST00000608853 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
ATXN2-226ENST00000608853 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
ATXN2-226ENST00000608853 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
ATXN2-226ENST00000608853 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-226ENST00000608853 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-226ENST00000608853 HRCP23327 699 aa19.14■□□□□ 0.65
ATXN2-226ENST00000608853 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
ATXN2-226ENST00000608853 APLP2Q06481 763 aa18.99■□□□□ 0.63
ATXN2-226ENST00000608853 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
ATXN2-226ENST00000608853 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-226ENST00000608853 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
ATXN2-226ENST00000608853 MYT1Q01538 1121 aa18.86■□□□□ 0.61
ATXN2-226ENST00000608853 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-226ENST00000608853 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
ATXN2-226ENST00000608853 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
ATXN2-226ENST00000608853 YTHDC1Q96MU7 727 aaKnown RBP18.65■□□□□ 0.58
ATXN2-226ENST00000608853 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
ATXN2-226ENST00000608853 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
ATXN2-226ENST00000608853 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
ATXN2-226ENST00000608853 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
ATXN2-226ENST00000608853 NEFLP07196 543 aa18.37■□□□□ 0.53
ATXN2-226ENST00000608853 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
ATXN2-226ENST00000608853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
ATXN2-226ENST00000608853 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
ATXN2-226ENST00000608853 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
ATXN2-226ENST00000608853 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
ATXN2-226ENST00000608853 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
ATXN2-226ENST00000608853 ITGAEP38570 1179 aa17.93■□□□□ 0.46
ATXN2-226ENST00000608853 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
ATXN2-226ENST00000608853 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
ATXN2-226ENST00000608853 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
ATXN2-226ENST00000608853 BCANQ96GW7 911 aa17.65■□□□□ 0.42
ATXN2-226ENST00000608853 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
ATXN2-226ENST00000608853 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
ATXN2-226ENST00000608853 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
ATXN2-226ENST00000608853 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
ATXN2-226ENST00000608853 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
ATXN2-226ENST00000608853 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
ATXN2-226ENST00000608853 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
ATXN2-226ENST00000608853 ANP32CO43423 234 aa17.45■□□□□ 0.38
ATXN2-226ENST00000608853 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
ATXN2-226ENST00000608853 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
ATXN2-226ENST00000608853 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
ATXN2-226ENST00000608853 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
ATXN2-226ENST00000608853 FKBP8Q14318 412 aa17.28■□□□□ 0.36
ATXN2-226ENST00000608853 MIER1Q8N108 512 aa17.26■□□□□ 0.35
ATXN2-226ENST00000608853 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
ATXN2-226ENST00000608853 ABCC9O60706 1549 aa17.19■□□□□ 0.34
ATXN2-226ENST00000608853 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
ATXN2-226ENST00000608853 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
ATXN2-226ENST00000608853 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
ATXN2-226ENST00000608853 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
ATXN2-226ENST00000608853 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATXN2-226ENST00000608853 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
ATXN2-226ENST00000608853 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
ATXN2-226ENST00000608853 P3H3Q8IVL6 736 aa17■□□□□ 0.31
ATXN2-226ENST00000608853 SCRIBQ14160 1630 aa17■□□□□ 0.31
ATXN2-226ENST00000608853 TONSLQ96HA7 1378 aa16.98■□□□□ 0.31
ATXN2-226ENST00000608853 NPM2Q86SE8 214 aaKnown RBP16.95■□□□□ 0.3
ATXN2-226ENST00000608853 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
ATXN2-226ENST00000608853 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
ATXN2-226ENST00000608853 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
ATXN2-226ENST00000608853 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
ATXN2-226ENST00000608853 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
ATXN2-226ENST00000608853 CLIP1P30622 1438 aa16.89■□□□□ 0.29
ATXN2-226ENST00000608853 NBR1Q14596 966 aa16.86■□□□□ 0.29
ATXN2-226ENST00000608853 IRX6P78412 446 aaPredicted RBP16.84■□□□□ 0.29
ATXN2-226ENST00000608853 CCDC136Q96JN2 1154 aa16.83■□□□□ 0.28
ATXN2-226ENST00000608853 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
ATXN2-226ENST00000608853 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
ATXN2-226ENST00000608853 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
ATXN2-226ENST00000608853 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
ATXN2-226ENST00000608853 EEA1Q15075 1411 aa16.8■□□□□ 0.28
ATXN2-226ENST00000608853 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
ATXN2-226ENST00000608853 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
ATXN2-226ENST00000608853 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
ATXN2-226ENST00000608853 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
ATXN2-226ENST00000608853 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
ATXN2-226ENST00000608853 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
ATXN2-226ENST00000608853 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
ATXN2-226ENST00000608853 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
ATXN2-226ENST00000608853 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.253e-9■■■■□ 21.5
ATXN2-226ENST00000608853 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
ATXN2-226ENST00000608853 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
ATXN2-226ENST00000608853 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
ATXN2-226ENST00000608853 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
ATXN2-226ENST00000608853 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
ATXN2-226ENST00000608853 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
ATXN2-226ENST00000608853 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
ATXN2-226ENST00000608853 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
ATXN2-226ENST00000608853 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
ATXN2-226ENST00000608853 FBLN2P98095 1184 aa16.54■□□□□ 0.24
ATXN2-226ENST00000608853 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
ATXN2-226ENST00000608853 TSHZ2Q9NRE2 1034 aa16.51■□□□□ 0.23
ATXN2-226ENST00000608853 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
ATXN2-226ENST00000608853 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms