RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 PELP1Q8IZL8 1130 aaKnown RBP27.41■■□□□ 1.98
ATXN2-201ENST00000377617 MYT1Q01538 1121 aa26.97■■□□□ 1.91
ATXN2-201ENST00000377617 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
ATXN2-201ENST00000377617 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
ATXN2-201ENST00000377617 CENPBP07199 599 aaPredicted RBP26.29■■□□□ 1.8
ATXN2-201ENST00000377617 ERICH6Q7L0X2 663 aa26.13■■□□□ 1.77
ATXN2-201ENST00000377617 CCER1Q8TC90 406 aaPredicted RBP26.08■■□□□ 1.77
ATXN2-201ENST00000377617 ZEB1P37275 1124 aaPredicted RBP25.99■■□□□ 1.75
ATXN2-201ENST00000377617 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
ATXN2-201ENST00000377617 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
ATXN2-201ENST00000377617 APLP2Q06481 763 aa25.62■■□□□ 1.69
ATXN2-201ENST00000377617 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
ATXN2-201ENST00000377617 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
ATXN2-201ENST00000377617 NEFLP07196 543 aa25.4■■□□□ 1.66
ATXN2-201ENST00000377617 HRCP23327 699 aa25.14■■□□□ 1.61
ATXN2-201ENST00000377617 YTHDC1Q96MU7 727 aaKnown RBP25.1■■□□□ 1.61
ATXN2-201ENST00000377617 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
ATXN2-201ENST00000377617 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
ATXN2-201ENST00000377617 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
ATXN2-201ENST00000377617 DAXXQ9UER7 740 aaPredicted RBP24.68■■□□□ 1.54
ATXN2-201ENST00000377617 TRIM41Q8WV44 630 aa24.64■■□□□ 1.53
ATXN2-201ENST00000377617 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
ATXN2-201ENST00000377617 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
ATXN2-201ENST00000377617 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
ATXN2-201ENST00000377617 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
ATXN2-201ENST00000377617 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
ATXN2-201ENST00000377617 GTF3C3Q9Y5Q9 886 aa24.18■■□□□ 1.46
ATXN2-201ENST00000377617 ZNF316A6NFI3 1004 aaPredicted RBP24.07■■□□□ 1.44
ATXN2-201ENST00000377617 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
ATXN2-201ENST00000377617 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
ATXN2-201ENST00000377617 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
ATXN2-201ENST00000377617 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
ATXN2-201ENST00000377617 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
ATXN2-201ENST00000377617 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
ATXN2-201ENST00000377617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
ATXN2-201ENST00000377617 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
ATXN2-201ENST00000377617 MYT1LQ9UL68 1186 aa23.72■■□□□ 1.39
ATXN2-201ENST00000377617 BCANQ96GW7 911 aa23.7■■□□□ 1.38
ATXN2-201ENST00000377617 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
ATXN2-201ENST00000377617 GLIPR1L2Q4G1C9 344 aa23.67■■□□□ 1.38
ATXN2-201ENST00000377617 EIF5BO60841 1220 aaKnown RBP23.61■■□□□ 1.37
ATXN2-201ENST00000377617 ITGAEP38570 1179 aa23.6■■□□□ 1.37
ATXN2-201ENST00000377617 ANP32AP39687 249 aaKnown RBP23.51■■□□□ 1.35
ATXN2-201ENST00000377617 ANP32CO43423 234 aa23.43■■□□□ 1.34
ATXN2-201ENST00000377617 CNGB1Q14028 1251 aaPredicted RBP23.42■■□□□ 1.34
ATXN2-201ENST00000377617 ANP32BQ92688 251 aaKnown RBP23.16■■□□□ 1.3
ATXN2-201ENST00000377617 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.3
ATXN2-201ENST00000377617 FKBP8Q14318 412 aa23.11■■□□□ 1.29
ATXN2-201ENST00000377617 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
ATXN2-201ENST00000377617 ZBTB47Q9UFB7 747 aaPredicted RBP23.07■■□□□ 1.28
ATXN2-201ENST00000377617 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
ATXN2-201ENST00000377617 ANP32EQ9BTT0 268 aa22.98■■□□□ 1.27
ATXN2-201ENST00000377617 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
ATXN2-201ENST00000377617 FAM50AQ14320 339 aaKnown RBP22.93■■□□□ 1.26
ATXN2-201ENST00000377617 NBR1Q14596 966 aa22.91■■□□□ 1.26
ATXN2-201ENST00000377617 CANXP27824 592 aaKnown RBP22.87■■□□□ 1.25
ATXN2-201ENST00000377617 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
ATXN2-201ENST00000377617 UPF2Q9HAU5 1272 aaKnown RBP22.82■■□□□ 1.24
ATXN2-201ENST00000377617 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
ATXN2-201ENST00000377617 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
ATXN2-201ENST00000377617 CCDC136Q96JN2 1154 aa22.71■■□□□ 1.23
ATXN2-201ENST00000377617 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
ATXN2-201ENST00000377617 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
ATXN2-201ENST00000377617 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
ATXN2-201ENST00000377617 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.21
ATXN2-201ENST00000377617 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
ATXN2-201ENST00000377617 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
ATXN2-201ENST00000377617 NEFMP07197 916 aa22.53■■□□□ 1.2
ATXN2-201ENST00000377617 TRIM44Q96DX7 344 aaPredicted RBP22.52■■□□□ 1.2
ATXN2-201ENST00000377617 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
ATXN2-201ENST00000377617 MIER1Q8N108 512 aa22.51■■□□□ 1.19
ATXN2-201ENST00000377617 PPM1GO15355 546 aaPredicted RBP22.48■■□□□ 1.19
ATXN2-201ENST00000377617 ARXQ96QS3 562 aa22.47■■□□□ 1.19
ATXN2-201ENST00000377617 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
ATXN2-201ENST00000377617 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
ATXN2-201ENST00000377617 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
ATXN2-201ENST00000377617 BECN1Q14457 450 aa22.39■■□□□ 1.18
ATXN2-201ENST00000377617 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
ATXN2-201ENST00000377617 TMC1Q8TDI8 760 aa22.3■■□□□ 1.16
ATXN2-201ENST00000377617 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
ATXN2-201ENST00000377617 RTN4Q9NQC3 1192 aaKnown RBP22.27■■□□□ 1.16
ATXN2-201ENST00000377617 GOLGA6L22H0YM25 854 aa22.27■■□□□ 1.16
ATXN2-201ENST00000377617 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
ATXN2-201ENST00000377617 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
ATXN2-201ENST00000377617 NOP58Q9Y2X3 529 aaKnown RBP22.26■■□□□ 1.15
ATXN2-201ENST00000377617 CDK11BP21127 795 aaKnown RBP22.22■■□□□ 1.15
ATXN2-201ENST00000377617 DEKP35659 375 aaKnown RBP22.2■■□□□ 1.14
ATXN2-201ENST00000377617 NCLP19338 710 aaKnown RBP22.18■■□□□ 1.14
ATXN2-201ENST00000377617 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
ATXN2-201ENST00000377617 SALL2Q9Y467 1007 aaPredicted RBP22.15■■□□□ 1.14
ATXN2-201ENST00000377617 PPP4R2Q9NY27 417 aa22.13■■□□□ 1.13
ATXN2-201ENST00000377617 SLC24A1O60721 1099 aa22.13■■□□□ 1.13
ATXN2-201ENST00000377617 PTMAP06454 111 aaKnown RBP22.11■■□□□ 1.13
ATXN2-201ENST00000377617 DNTTIP2Q5QJE6 756 aaKnown RBP22.11■■□□□ 1.13
ATXN2-201ENST00000377617 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
ATXN2-201ENST00000377617 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
ATXN2-201ENST00000377617 L1TD1Q5T7N2 865 aaKnown RBP22.01■■□□□ 1.11
ATXN2-201ENST00000377617 RBM19Q9Y4C8 960 aaKnown RBP22■■□□□ 1.11
ATXN2-201ENST00000377617 ABCC9O60706 1549 aa21.96■■□□□ 1.11
ATXN2-201ENST00000377617 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms