RNA–Protein interactions for RNA: ENST00000392485.2

SRSF2-203, Transcript of serine and arginine rich splicing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF2, Length 2,885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF2-203ENST00000392485 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
SRSF2-203ENST00000392485 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
SRSF2-203ENST00000392485 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
SRSF2-203ENST00000392485 HRCP23327 699 aa25.07■■□□□ 1.6
SRSF2-203ENST00000392485 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
SRSF2-203ENST00000392485 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
SRSF2-203ENST00000392485 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
SRSF2-203ENST00000392485 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.53
SRSF2-203ENST00000392485 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
SRSF2-203ENST00000392485 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
SRSF2-203ENST00000392485 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
SRSF2-203ENST00000392485 MYT1Q01538 1121 aa24.11■■□□□ 1.45
SRSF2-203ENST00000392485 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
SRSF2-203ENST00000392485 ABCC9O60706 1549 aa23.91■■□□□ 1.42
SRSF2-203ENST00000392485 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
SRSF2-203ENST00000392485 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
SRSF2-203ENST00000392485 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
SRSF2-203ENST00000392485 NACADO15069 1562 aa23.57■■□□□ 1.36
SRSF2-203ENST00000392485 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
SRSF2-203ENST00000392485 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
SRSF2-203ENST00000392485 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
SRSF2-203ENST00000392485 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
SRSF2-203ENST00000392485 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
SRSF2-203ENST00000392485 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
SRSF2-203ENST00000392485 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
SRSF2-203ENST00000392485 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
SRSF2-203ENST00000392485 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
SRSF2-203ENST00000392485 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
SRSF2-203ENST00000392485 WIZO95785 1651 aa22.95■■□□□ 1.26
SRSF2-203ENST00000392485 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
SRSF2-203ENST00000392485 CENPBP07199 599 aaPredicted RBP22.91■■□□□ 1.26
SRSF2-203ENST00000392485 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.247e-7■■■■■ 67.4
SRSF2-203ENST00000392485 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
SRSF2-203ENST00000392485 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
SRSF2-203ENST00000392485 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
SRSF2-203ENST00000392485 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.23
SRSF2-203ENST00000392485 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
SRSF2-203ENST00000392485 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
SRSF2-203ENST00000392485 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
SRSF2-203ENST00000392485 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
SRSF2-203ENST00000392485 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
SRSF2-203ENST00000392485 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
SRSF2-203ENST00000392485 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
SRSF2-203ENST00000392485 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
SRSF2-203ENST00000392485 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
SRSF2-203ENST00000392485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.18
SRSF2-203ENST00000392485 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
SRSF2-203ENST00000392485 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
SRSF2-203ENST00000392485 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
SRSF2-203ENST00000392485 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
SRSF2-203ENST00000392485 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
SRSF2-203ENST00000392485 ANP32EQ9BTT0 268 aa22.22■■□□□ 1.15
SRSF2-203ENST00000392485 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
SRSF2-203ENST00000392485 SOGA1O94964 1423 aa22.05■■□□□ 1.12
SRSF2-203ENST00000392485 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
SRSF2-203ENST00000392485 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
SRSF2-203ENST00000392485 PRKCSHP14314 528 aaPredicted RBP22■■□□□ 1.11
SRSF2-203ENST00000392485 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
SRSF2-203ENST00000392485 MIER1Q8N108 512 aa21.98■■□□□ 1.11
SRSF2-203ENST00000392485 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
SRSF2-203ENST00000392485 TSHZ2Q9NRE2 1034 aa21.93■■□□□ 1.1
SRSF2-203ENST00000392485 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
SRSF2-203ENST00000392485 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
SRSF2-203ENST00000392485 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
SRSF2-203ENST00000392485 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
SRSF2-203ENST00000392485 EEA1Q15075 1411 aa21.77■■□□□ 1.08
SRSF2-203ENST00000392485 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
SRSF2-203ENST00000392485 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
SRSF2-203ENST00000392485 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
SRSF2-203ENST00000392485 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.07
SRSF2-203ENST00000392485 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
SRSF2-203ENST00000392485 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
SRSF2-203ENST00000392485 CFTRP13569 1480 aa21.57■■□□□ 1.04
SRSF2-203ENST00000392485 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
SRSF2-203ENST00000392485 CUX1P39880 1505 aa21.53■■□□□ 1.04
SRSF2-203ENST00000392485 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
SRSF2-203ENST00000392485 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
SRSF2-203ENST00000392485 KIF21BO75037 1637 aa21.51■■□□□ 1.03
SRSF2-203ENST00000392485 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
SRSF2-203ENST00000392485 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
SRSF2-203ENST00000392485 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
SRSF2-203ENST00000392485 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
SRSF2-203ENST00000392485 CLIP1P30622 1438 aa21.4■■□□□ 1.02
SRSF2-203ENST00000392485 BCANQ96GW7 911 aa21.39■■□□□ 1.02
SRSF2-203ENST00000392485 RBM19Q9Y4C8 960 aaKnown RBP21.36■■□□□ 1.01
SRSF2-203ENST00000392485 PRXQ9BXM0 1461 aa21.33■■□□□ 1
SRSF2-203ENST00000392485 PRDM2Q13029 1718 aa21.3■■□□□ 1
SRSF2-203ENST00000392485 KIF27Q86VH2 1401 aa21.3■■□□□ 1
SRSF2-203ENST00000392485 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
SRSF2-203ENST00000392485 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
SRSF2-203ENST00000392485 MSH5O43196 834 aa21.22■□□□□ 0.99
SRSF2-203ENST00000392485 NESP48681 1621 aa21.22■□□□□ 0.99
SRSF2-203ENST00000392485 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
SRSF2-203ENST00000392485 FKBP8Q14318 412 aa21.21■□□□□ 0.99
SRSF2-203ENST00000392485 CUX2O14529 1486 aa21.2■□□□□ 0.98
SRSF2-203ENST00000392485 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
SRSF2-203ENST00000392485 APLP2Q06481 763 aa21.19■□□□□ 0.98
SRSF2-203ENST00000392485 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
SRSF2-203ENST00000392485 HNRNPUL2Q1KMD3 747 aaKnown RBP21.19■□□□□ 0.98
SRSF2-203ENST00000392485 IGF1RP08069 1367 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms