RNA–Protein interactions for RNA: ENST00000382110.6

TRAPPC12-202, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAPPC12, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-202ENST00000382110 NISCHQ9Y2I1 1504 aa40.3■■■■■ 4.04
TRAPPC12-202ENST00000382110 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
TRAPPC12-202ENST00000382110 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
TRAPPC12-202ENST00000382110 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
TRAPPC12-202ENST00000382110 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
TRAPPC12-202ENST00000382110 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
TRAPPC12-202ENST00000382110 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
TRAPPC12-202ENST00000382110 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
TRAPPC12-202ENST00000382110 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.85
TRAPPC12-202ENST00000382110 ABCC9O60706 1549 aa32.15■■■□□ 2.74
TRAPPC12-202ENST00000382110 SCRIBQ14160 1630 aa32.13■■■□□ 2.73
TRAPPC12-202ENST00000382110 LOC105371045A0A1W2PR82 267 aa32.01■■■□□ 2.71
TRAPPC12-202ENST00000382110 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
TRAPPC12-202ENST00000382110 PCGF6Q9BYE7 350 aa31.95■■■□□ 2.71
TRAPPC12-202ENST00000382110 HRCP23327 699 aa31.94■■■□□ 2.7
TRAPPC12-202ENST00000382110 RB1CC1Q8TDY2 1594 aa31.61■■■□□ 2.65
TRAPPC12-202ENST00000382110 NACADO15069 1562 aa31.58■■■□□ 2.65
TRAPPC12-202ENST00000382110 CECR2Q9BXF3 1484 aa31.51■■■□□ 2.64
TRAPPC12-202ENST00000382110 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
TRAPPC12-202ENST00000382110 PPARGC1BQ86YN6 1023 aaKnown RBP31.38■■■□□ 2.61
TRAPPC12-202ENST00000382110 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
TRAPPC12-202ENST00000382110 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
TRAPPC12-202ENST00000382110 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.6
TRAPPC12-202ENST00000382110 WIZO95785 1651 aa31.19■■■□□ 2.58
TRAPPC12-202ENST00000382110 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
TRAPPC12-202ENST00000382110 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
TRAPPC12-202ENST00000382110 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.52
TRAPPC12-202ENST00000382110 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
TRAPPC12-202ENST00000382110 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
TRAPPC12-202ENST00000382110 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
TRAPPC12-202ENST00000382110 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
TRAPPC12-202ENST00000382110 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
TRAPPC12-202ENST00000382110 SMARCA2P51531 1590 aa30.51■■■□□ 2.48
TRAPPC12-202ENST00000382110 ZEB1P37275 1124 aaPredicted RBP30.51■■■□□ 2.48
TRAPPC12-202ENST00000382110 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
TRAPPC12-202ENST00000382110 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
TRAPPC12-202ENST00000382110 SOGA1O94964 1423 aa30.3■■■□□ 2.44
TRAPPC12-202ENST00000382110 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
TRAPPC12-202ENST00000382110 CEP162Q5TB80 1403 aa30.13■■■□□ 2.41
TRAPPC12-202ENST00000382110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.1■■■□□ 2.41
TRAPPC12-202ENST00000382110 PELP1Q8IZL8 1130 aaKnown RBP30.1■■■□□ 2.41
TRAPPC12-202ENST00000382110 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
TRAPPC12-202ENST00000382110 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
TRAPPC12-202ENST00000382110 WRNQ14191 1432 aaPredicted RBP eCLIP30.06■■■□□ 2.4
TRAPPC12-202ENST00000382110 TNIKQ9UKE5 1360 aa30.05■■■□□ 2.4
TRAPPC12-202ENST00000382110 PEG3Q9GZU2 1588 aa30.04■■■□□ 2.4
TRAPPC12-202ENST00000382110 EEA1Q15075 1411 aa30.01■■■□□ 2.39
TRAPPC12-202ENST00000382110 UBTFP17480 764 aaKnown RBP29.99■■■□□ 2.39
TRAPPC12-202ENST00000382110 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
TRAPPC12-202ENST00000382110 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
TRAPPC12-202ENST00000382110 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
TRAPPC12-202ENST00000382110 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
TRAPPC12-202ENST00000382110 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
TRAPPC12-202ENST00000382110 CEP164Q9UPV0 1460 aa29.67■■■□□ 2.34
TRAPPC12-202ENST00000382110 KIF21BO75037 1637 aa29.61■■■□□ 2.33
TRAPPC12-202ENST00000382110 CLIP1P30622 1438 aa29.55■■■□□ 2.32
TRAPPC12-202ENST00000382110 RAPGEF2Q9Y4G8 1499 aa29.53■■■□□ 2.32
TRAPPC12-202ENST00000382110 SCAF1Q9H7N4 1312 aaKnown RBP29.48■■■□□ 2.31
TRAPPC12-202ENST00000382110 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
TRAPPC12-202ENST00000382110 TOP2BQ02880 1626 aa29.43■■■□□ 2.3
TRAPPC12-202ENST00000382110 VPS8Q8N3P4 1428 aa29.41■■■□□ 2.3
TRAPPC12-202ENST00000382110 DIEXFQ68CQ4 756 aaKnown RBP29.39■■■□□ 2.3
TRAPPC12-202ENST00000382110 HNRNPUL2Q1KMD3 747 aaKnown RBP29.38■■■□□ 2.29
TRAPPC12-202ENST00000382110 MYT1Q01538 1121 aa29.34■■■□□ 2.29
TRAPPC12-202ENST00000382110 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
TRAPPC12-202ENST00000382110 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
TRAPPC12-202ENST00000382110 APLP2Q06481 763 aa29.26■■■□□ 2.27
TRAPPC12-202ENST00000382110 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
TRAPPC12-202ENST00000382110 PRXQ9BXM0 1461 aa29.2■■■□□ 2.27
TRAPPC12-202ENST00000382110 CUX1P39880 1505 aa29.19■■■□□ 2.26
TRAPPC12-202ENST00000382110 NEUROD1Q13562 356 aa29.17■■■□□ 2.26
TRAPPC12-202ENST00000382110 ACIN1Q9UKV3 1341 aaKnown RBP29.15■■■□□ 2.26
TRAPPC12-202ENST00000382110 ZNF316A6NFI3 1004 aaPredicted RBP29.15■■■□□ 2.26
TRAPPC12-202ENST00000382110 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
TRAPPC12-202ENST00000382110 CFTRP13569 1480 aa29.08■■■□□ 2.25
TRAPPC12-202ENST00000382110 ARAP1Q96P48 1450 aa29.08■■■□□ 2.25
TRAPPC12-202ENST00000382110 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
TRAPPC12-202ENST00000382110 KANK4Q5T7N3 995 aaPredicted RBP29.01■■■□□ 2.23
TRAPPC12-202ENST00000382110 CENPBP07199 599 aaPredicted RBP28.92■■■□□ 2.22
TRAPPC12-202ENST00000382110 GTF3C3Q9Y5Q9 886 aa28.85■■■□□ 2.21
TRAPPC12-202ENST00000382110 ARHGAP35Q9NRY4 1499 aa28.83■■■□□ 2.21
TRAPPC12-202ENST00000382110 MIER1Q8N108 512 aa28.8■■■□□ 2.2
TRAPPC12-202ENST00000382110 CUX2O14529 1486 aa28.78■■■□□ 2.2
TRAPPC12-202ENST00000382110 DHX57Q6P158 1386 aaKnown RBP28.78■■■□□ 2.2
TRAPPC12-202ENST00000382110 IGF1RP08069 1367 aa28.78■■■□□ 2.2
TRAPPC12-202ENST00000382110 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.19
TRAPPC12-202ENST00000382110 YTHDC1Q96MU7 727 aaKnown RBP28.75■■■□□ 2.19
TRAPPC12-202ENST00000382110 RRBP1Q9P2E9 1410 aaKnown RBP28.73■■■□□ 2.19
TRAPPC12-202ENST00000382110 PRDM2Q13029 1718 aa28.7■■■□□ 2.19
TRAPPC12-202ENST00000382110 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
TRAPPC12-202ENST00000382110 CLSPNQ9HAW4 1339 aa28.66■■■□□ 2.18
TRAPPC12-202ENST00000382110 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
TRAPPC12-202ENST00000382110 CCNB3Q8WWL7 1395 aa28.63■■■□□ 2.17
TRAPPC12-202ENST00000382110 ITGAEP38570 1179 aa28.61■■■□□ 2.17
TRAPPC12-202ENST00000382110 CC2D2AQ9P2K1 1620 aa28.53■■■□□ 2.16
TRAPPC12-202ENST00000382110 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
TRAPPC12-202ENST00000382110 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
TRAPPC12-202ENST00000382110 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
TRAPPC12-202ENST00000382110 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
TRAPPC12-202ENST00000382110 MAP3K1Q13233 1512 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms